Gene detail

Detailed information of BRAKERLUSP00000033294.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_020630618.1, elongin-C-like [Orbicella faveolata]
Species Blastomussa wellsi · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KII4	Elongin-C OS=Bos taurus OX=9913 GN=ELOC PE=1 SV=1
Q15369	Elongin-C OS=Homo sapiens OX=9606 GN=ELOC PE=1 SV=1
P83940	Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008238 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03931 all species →	Skp1_POZ	Skp1 family, tetramerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001232 all species →	Family	S-phase kinase-associated protein 1-like	Interproscan
IPR039948 all species →	Family	Elongin-C	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR016073 all species →	Domain	SKP1 component, POZ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20648 all species →	ELONGIN-C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0030674 all species →	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0070449 all species →	Cellular Component	elongin complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03872	ELOC, TCEB1; elongin-C	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.