Gene detail

Detailed information of BRAKERMNPP00000002333.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: XP_046846445.1, ABC transporter G family member 28-like isoform X3 [Xenia sp. Carnegie-2017]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERMNPT00000002333

ATGAACCGCACGATCGTTTGTTTCCTGCTGTTTTCGGCTCTCGATGCACCGGCATACACAGCTCTTCTCTATAACGTCATCCCCACTCTGGTTGCTGTCATAGGCCTGGCAGCTAATGCCGCCTTTATTTTCTGCATGCGAAGGACGGGTCAGACTTCCAAGATATCCAACAagcttgttattttgatgacGTCTTCTGACCTGGTATTGAGCGTGTTTCTTCCCATATACTTTTCGCTCGTTGCAACGAACGCCCGCTCTCCTGATTATTGTGCGCTGAAGAAGATCGTCGAATTTACCGCCCTAACCGCCTGCCACTTTTCGTTCAACGTTTTCTGCTGCATCACACTGGATAGGTACCTGCACATAAAGAAAGCGATGACGTACGATGAACATATGAACGGTTTTCGATTCAAAGTCCTCGTTGGGATCGCGTTCTCCGTTGCCGCGTTAACGGTCCTTACCCTTGCTATCTTCCCGTCATTTCCGGTTGTTGCAGGCTCATGTCTCATCTCGGTTATTTGCATCGTGATGATGATAATCGCCAATATAGCCATGACGCGCGCTCTCAAGTCCTACCAATTTGGCGCGCGAACATCAGCCGATCCGAGCGCGTCGGCCCGCGCGCCCTCCAGTACTGCCAACCCGGCCAGTAACTCACGCGATGCAATGTTGCGGAATTCGCGTCCGGTTAAAACGCTCCGGCTGCTGACGCTTGTGTTGGCCGTCTTCTACGTTCCGTACGACATTTGCACGATCGCGTGGACGTACAAGGCTTTTTACTCCGATGCGGGGCCTGGTATGGCCATGGGTACAGTGCTGTATTGCGCAGGCATCCTGATAATGTCAAACGCGTGGGAACAACGAGGAATATCTGGTGGCCAGAGGAAACGTGTCAATATTGGCATGGAATTGATTGCGGACCCAACATTACTGTTTCTAGATGAGCCAACAAGCGGACTCGACAGCACTTCAAGTTTGACCGTCCTAAATGCACTTCGAAAGGTTGCTGAGAAAGGGAGGCTGACCGTAGCATGCGTAATCCATCAGCCAAGATATGAAATATTTCGGATGTTCCACAACATATTGCTGCTTGCCCCAGGGGGACGCACTGTGTACCAAGGCTCGGTTCCTAACGCGGAGACCTACTTCGCCTCCCTCGGCTTCCAAATCCCGGAACACGCCAACCCAGCTGATTTTTACATGGACGTCATTGGCGGAGCGACCAGCGGCAACTTCTCGCACGACCCAGAAAAGCTGCCCCAATACTGGATTGAGAAACGGGACAATTTTGTCACCGATAGGGCCAAAGATCAGATGGCGGGGGCATGCGGAGATTGTGGAAAAGAATTTCGCATTTCAGATCGACCTCAACCGAATGTTTTCAACCAGTTCTTCAGCTTTCTCAAACGTGAATTCATTCTTCAGTTTCGTCAGATCAAGACTGTCCTTCTGGACACGTTCCTTGTTCTTCTTGCTGGCGGTGTTCTCGGGGGACTTTACAGAGAGGTAAAACTGAATCAGTTTCTCACCATGACAACGATGAGTGGTATGGGCGTTGGGTTGGTGGCGTGTATTCCTGCTCTCAGGGTTTTCGGGCAGCTGCGTCCAGTTTTTTGGAGAGAAGCAAGTGCGGGTGTCAACAGATTTAGTTACTTCATGGCGGGTAACGTTTCCCAATTGCCACAGATTGCTTTGATGCCTATAATCTATCTCTCGCTGCAGTATACATTTACAGCACCTCGTGgACTGCTGCACGATCATTATCTTGTGTCTCTGGCGGCCTGGTTCGGTGTGTCCGGCTTCGGGTACCTTATATCGTGCGTCTTCAATCCACGCAACGCTCAGATGGCCACTGTGCTcttcattttaatttcttcGCTATTGTCAGGGTCGTCGCCAACTCTGTGCACAATGAACGACTTGAAGGTGATTGGTCCAGCCTTCTATAGCCTCTCATACGCACGCTGGTATGTCGAGGCTCTGTTTGAATCCGAGGTCAAGCACTATTACGCAGTTCACCAACACGAGATCGACTACTTCGCGTTTAATCGCAATTACTCGCTGGACAAGTTTTGGCTGTGTGTGGGCGTCCTGTTCGGCTTTGGATTTGTCACGAGAATTGTCGCAtttttttgcttgattttcatGAATAGAGGCAAGCAGCAGTAG

Transcript

BRAKERMNPT00000002333

Protein

Uniprot

Uniprot term	Description
Q9FF46	ABC transporter G family member 28 OS=Arabidopsis thaliana OX=3702 GN=ABCG28 PE=3 SV=1
Q9MAG3	ABC transporter G family member 24 OS=Arabidopsis thaliana OX=3702 GN=ABCG24 PE=2 SV=2
Q9SJK6	Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana OX=3702 GN=WBC30 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF19055	ABC2_membrane_7	ABC-2 type transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR043926	Domain	ABC transporter family G domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050352	Family	ATP-binding cassette subfamily G transporters	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48041	ABC TRANSPORTER G FAMILY MEMBER 28	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan