Gene detail

Detailed information of BRAKERMNPP00000003966.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: CAH3145987.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERMNPT00000003966

ATGGGGACGGATGTCGTGATTGAGGGGATCCGCGTGAATCCACCAGTTGTAGAGTTTCCTGACATCGAGTCTGGTGTTGTTTATCAAACTCAAATCActattcaaaattttggaaaagttTCAAGGAGGATTAGATTTAATTCACCATCATCTGAGaaatttcaGCTGCACTGCAAGAATCCTGACAAGGTGATTGCTCCTGGTCTAGAAGTTTCAGTTTTAATTGAGTTCTGTAGCCAACAACAAGAAGACCATGAGtcaaattttctgcttttggTTGATGAGGAAGTCATCCAAGTGCCACTCACAGCTTTAGCTCCAAAACCAGCAATGGAGATTTCAGGACCTGTTGACTTTGGGACAATCATTGCAGATGGCAGAATCCTGAGGCAAGAAATTGCCATTCTAAATAGAGGGTCCAAGAATGGGGCCTTCAAACTGACTTATACAGGAATGGAACCTTTAACTATTGTTCCAAAACAAGGAATTGTGAAAGCAGGCTATTCTCAACCTATAAGAtttgaaTTTATCAGTAAAAAACCAGGCCACATGGAGGAATGCATAAGTGTGATGATGGAAGGACAACCTCCCTGTGAGGTGCATGTTTTAGCTGACATTGCAAAGCGTTCTCTGTTGCTGCTTTCAATGGATACTGAAGAGCGAGTGAACCATGTCGAGTTTGGACAAGCTTATTACGGAACTGACGTTCTAAGGTCATGCGTCCTGTTTAATCAAAGCCCTGACCCAGTTagttttgttgtcattttagAGGAAGGAGGAGAGGGCCAAGAGCTGGGCGTGGACCTAAGCGTCACGAAGAGTACTGCGTTTCTAACAACCAACAAGAAGAGTCGTAGATATGAAGATAATGATCTGACGTCACTTGTCACAGCCAGTCCGACGCAGGGTACACTGGCTCCTTACGACAAACGACTATTGCATTTCAAGTTCAGCCCACGCTGCTCAAAATCCGATCAAGGTTGGCTCTCAAGTGACAAGTCAGAGCCACGCAGGGATTATGCTGTGTTTGTGCACATTGACATTGTTGGGAACATCGTCAAGTTGGATGGAAAAACGACGCCCACAGAGGCCAATGAATCACGAGTCGAGGTTGCACTGACAGGCACTGCTCTGCCTGTCTCCCTGTCTGTATTACCAAGTCCAACCATCGAGTTCGACAACTGTTCAGTCGGCAGCAGCCTTGATGGCAGAGTCACCATTCGCAATGATTCGCCTGACCTGCCCGTCGCCTTCGCAGTGCCAAAGTCGGCGCACTTTGTTCCATTTCCGCATGCGGATTGCCTCGACCCCAATGGATTCATGGAGCTGCTTATTTCCTTTCGGCCAAACCAAATCGGAAACTTCAAGCCAAAGATGAACATTGTAGTGCTTGGTTACACCGTGGAGATCGGTGGAGATTTCGGCAGCTTACCCAAGTTCAAGCAGAAGGCAATCTTCAAATATCCGTTGCAAGTAAGTGGCGTTAGTCTGCCTGTTGTTGGTAAGAAGACAGCCAAATCATTGAGTGCCCAAGGGAGGCTGCTTCCACAGGAGGAAAATGACAGCAGTACAAACCTAGTTCTATCTGGCATGGGTACGTCATTAAGGGTTTTCAGCTCTGATGACACGAATGCAGGCATGATTCGATCAAAAGCTTCCGGGGTGTCTACTGGAAAGGATTGCAAAAAGCTTTCTACTGATCTCCCTGTTGTCACTGCGGGACCCGACGATAGGGCAACCAGCATCAGGCCAAgtaacaagaaagaaaaaattgtGACGCAGTTCACCAAAACCGAAAGATACACATACGTGGATCCGGATTATGAGTATAGCTTCGAAGAAGAGGAGGAGCGCCGTTTTCACCGACAAAAATACGTTGATTACATCCAGAAGCTGAGGAAACAGAAGGCAGAGAGAGAAAAAGCTCTattgCATGGAAGAAGAGTTATTCCCATAAAGCCAGAGAAACAACTCTTGAcatcaaaaagtcttgaaGCATTGCAGCGGAGTGCTGCAACGAAAAAGGTGGCCGACGGACTGAAAGCTCTTCCAACAACAGCAGTGGAAAAGACCGACTGCTCCAAAGTTCTTTCACCGAAGGAACTTTACCAGATAGTTCTAGAGCCTAAATTCGTTGATTTTGGCGAAGTCTGTGCCAAGTCATTAGCAtcgaagaaaatgaaaatagtaAACAGTCTGAGTTCTCACATCTTCGTCAAGGCAGAGaTCGACTGTCGCGAACTTCGTCAAACATCGCCTCTTTCTCAAGTTGTGCCACCTGGAAGTGTGGCTGCGCTGGAATTCATATTTGAATCAAACACCCTCGGAAAATTTGAAAGGAGCGTTTCATATTCAATAAATGGACATCACAAGGCCCATGTCATTGTGCTCGCGGAGGTAGTGACCGTGGCTTTGTCGTTATCCTGCCAGGAAGTATCTGTTTCTCCCGCGCCTGGGTTGCCTCCTGAAGCAGGTATGAGGAAAACTGTTACTTTGTGCAACAACCGCAACATGACTGCAGAATTTTCTTGGGCTCCAGTTGTTGGAAAAGATGGAACAGCCTTTTCAGTTAGGCCTGCAAGAgGAACTGTGAATCCGAATTCAAGCCTCGAATGCGAGGTAGTGTTCTACCCGTCATACTTTGCTCCGTTGACTGgtttgtttcatttgaatgTTGAAGGCGGCAATCAGTTGGAGTTGCATACAAACGCAGAGATTCCGTCGACATCTTGTTCCTTTGTTGAGCATCGAGTAATGTTTGGTGCCGTTCCACTTAACCTTGTAACCACGCGATCAGCGTTTTTGAAGAACACAAGTCAAAGCCATGCTTATTTCAAGGTGGTGGATCAATCTCCCATTCCAGGAATGACCATTACCCCACGAACAGGCGTCGTTCCCGTTGGAGGGACAGCAGAGTTGCTGGTGAACTACAAACCACTAACAGTGCAGAAGTTTGACACGCAAATCGAAGTTGCTGTCAGGGGATGGAAGCCGATATTTCTTCGCTTGGGAGGCCATGTTGAACCCCCCTGTGTCGATATTGACATGGAGTCATTCCAGTTTGGAGGAGTTTATTGCGGAGCAAAGGCCACCATTCCATTTAAATTGAAGAATCTGGCGCGTTCTCGAGCAAAAATTGCGTTTGATTTGTCCCGGCAAAGGGACTTTCTCTTGACCTTTGGCGAATCCGGCGATGCTGGTCAGGAAATTCCAGATGCCGAGGGCTGCTTTGAAGTCGGTCTCATTGGACAGCAGGAGCTGCAATGCTTCCTTGAGTTCAACCCTGCGGAAGTTGCGTCGTACGATTTCATCATCCCGGCCGTCATAAACCAGACGATCGCCCCAACGCCTCCTCCTTCACCCTACCCTGCCTCCGTAGCGATGTCAAAACCGGGTCACATCTCAGCAGACTTTGACAGAAATGAGTCAAAAAGGGTTGTCCAGTTTCCTACCCCAAGTCGCCGAGTTCAAGGGACAGCTTTGAGGGCCCCTCTGCAGGTTTCAAGCACTGAGATCACCTATCATCTTCCATCGGGCTACCTTGATATGGGTATTCAAACATCCGCGGGAAGAGCTGCGGGTATAATGCTTGTCAATAATTCAAGTACACAGCTGACTTGGCATTTAGACCTTGAAAAGGCGGGTCCGTTCTTCGTAGACGGCACGTTCCAGGTTTTACACCGGTCCGGCTCTCCTTTCCAACTAACCAGAGAAGGAAGAGCGGTCACTTTCCCAGAGATTACGATGTACAGCGGAGAAACATCACAGCTAGGGATACTCTTTTCTCCGAAGGACCCCGGCATTTACGAGGCAAACGTTCCAGTTATTCTTGATGACGACATTGCGCACCCATATCGCATCATTCATTTGCACGGTGAACTTGAAGCCCCAAGCATCCGTTTTGACCCGGGTGCTATTCATTTCTTTCCAACACCTCTACGCACCAAGACAACAATGGACTTCTACCTTATTGCAAGTGGATACAGAAGAGCTGTAGCTGTTCAGTGCGTCATACCTGAAGTAGAGCTGGAAGATGGCAGCGAACTACAGGTTCTCAACGTGACATTTCCAAACGGCAACGTCATTCAGCCCTGCTGCCAAGACTTTGGGGAAAAGGAGCCCTTTAAAGTTCTGTGTCAGATTTCATTCGAGTCTCCAAAGCCAGTGTCTTTTAGCACTGCTATAGAGTTTGTCACGGATCAACACAGACACCAGCTGCACGTTATGGCCACTGCGGACAACTGCATTTTATCTTGCTTCAAGTTTCTGGCAGTGCATCAGTCTGATTTTCACATCATTTGCGAGGAACTTCCTGGTAAAGAAGGAGTTCCAGGAATTGCAAGCAAAAAGGAGGGAATCGCCTACGGGGATGCCATGCTTGTTCCTTGCGTCACTGCCATCAAATCTCCAACTGAAAACTCCAACATAACAACCAGCACTTCGTTTGGCTTGAGTGTTTCAACATACCCCGAATCGTCAATCTCGTCATCCACGGCGAGATCGCCAATAGAAGACCACAAAGAAGAGGAAGAGCACGAGGAGACGACGATCCCTTACGAATATTGTGGGACTGAGGACACGGCTGAAACTGAGGAGGAGAAGTACCTCAAGGACGTGATGAAGTCGGTGCAAAGATGGTACTCCTCCCAAGCCTGGTCGACGGGACCCAGTCCGATTACTTTGCCCTTTTCACTAAGAGCCTGCTTCGGCCCAGGGCTGGATGATGGGGGGACGACTCGAGCGGGAATATGGAGTCgtgaaaagaagaaggagaacAAGACGGTCTTTGATGTTGTTACGCACTTGTGTGGCAAGACAATTCCTGGTATCCCGATCAATGCCTCGGTGCCTACGGAGCCGTTTGAAAGGACGAAGCACCTGCATTGGATGTACGCTACCCTGCTAACCTTCTTGAGATGTCAAGGGGCTATGGTTGCCTCTATTCTGCCGGAATATCTTCTGGACAAAGAAGACTTCAAGAGGCTGGTGCTGATGCGAGACTCTGAGATGTCAAGTGCCGGTGTGAGATTTTCAGCTCGAAGTCTGGAGAGGGAGCAGGAGAAATATGAGTTCCTTTCAAAGCATTCATGGACCGATCTTTTGCTGCAAATAATAAAGGTGCTTGTGTTGAACAGAATCACTCCACAGCAGTACCGCAAGATAGCCCTTCCCAGCAAAGATGCATTGCTACCGGTCCTCAATGCTGACCCCCTGAGCAGCAACGTGTTCAGTGTTGGCGAGCGAATCGTCCTCTCTTGGGTGAATTATCATTACCAGCACCAGAGATTGGCAGGACTGTGGAAAACCAGCATTGACGGCAAAACCCCTTCATCAAGATGGATTGTGAATTTCGAGAATGATTTCTTAGATGGCCTGGTACTTGCTTCCCTGATTGCCGCGCATGCTCCGTTCATCGTCCCGGAGTTCTTCCATTCAATGTATACACATCCCACTACAGCCGAACAGTGTCTGCACAATGCACTTAAAGTAGTTGGAGCCGTTCGCTATCTGGGCATGGATTACGATGTGGTGGCCACGGACATTACAGAGCCGAATCCCATCAGCATCTTGATGCTATGCATCTATCTATACCACCGTCTTCCTCATTATATTCCGCGGTCCAAAATAGAGTTCAATGGCCCGTTGCATACAGACGTCACTAAGGAGGTGAAACTGCAAAACCCAAGTACTAAGCCTATTGTCTACCAGATTATCATTGCTGGAGAGCACGGGGCCGACTTCCATTCGCCAACAGGACGTACAATAAAGGTTCCTCCAAAGGGGCACGTTATGCTGCCAATAGAATACCGAAGCCGTTTCCTTCGCGCATGCTCCGCAATCCTCATTCTTGTTGGTCGCAGAGTTGGCTCTCAGGTTGGGTCCACATTGGTCTTCAACCTGGTGACATCTGTCAACAACATCACTCCAATGGCTGTCATCAAAACTGACTCCCCCTGTTACGAGCTGAAGAAGATAAATATTGATGTCAAGAATCCCTTCAACAAAGATGCGgatttcaaaatcatcttGGTTGAGGCCAAGCCCAATGCACTAGCACCTTCGCCTCAAGCCAAGAAGAAGACCAaacattcttctttgaaaaaagtcGAATCCAAGATTGACCATGGTATTAAGAGAAAGCCAGATTTAAAGAAGAATGAAAGTTTAGTCGAAAGCAACCCTTCAGCAAACAAAGTTGAACAAGCGGAAAACGTTGAAATGAGCATAAGTGCATTCTGGTGCCCAGCAAAGACAATTCACGTCGCACCATTTGGAACTGCGTCCCTGGAGGTCCAGTTTCTGCCATTTTCTTTAGGCCATCGTCAATGCTCAGTCCTGTTCCTAAACGAGGATGTCGGTGAGCTCGTTTACTCAATCGAGGCTGAGGCTTTGTTGCCATTGCCAGCTTCCCTGCCATATCAACCTTCGTCGCACAGTGTGCGGGTTAGTAGTGCCGCCGCAGCGGAGCGAAGCCGTGGTTTATTTGGAGGCGACGATCGGGTTGTCTACTGGCAGTGTAGCGTCGGCGATGAGATTGCGGAGGAGGTCCTGTTGCCAGTCGTCAATGAGGCTAAAGAAAACGCATTGGTGGTAGCTGCGCGGCAGCGTATGTCTGAAAAGGAGCTGCGACGCCGGGAAATCACTGGCAGTTTGTCAGTAGCAACGATCGCAAATGCCCTGCAGTCGATGGGCCTTTCTAGCGAGTCCCTTGCTGTCACCTCGCCGTGTTCACTGGCACACGAAAGCGAGAACATTCATTTTACTGTCGAAGGGAATTCGAAGTTTTTCAAGCTACCAAAATCATGCAACATGACTGTTTCAGTCAACAAAAGAAATGACAACGACAACGCGAAGCTTCCTGTGGGCTTCGTTCCTGATGGGCCTGGGCACTACCAATGTCGCGTGATACTGCGGGCGCCAAACGACATTCGCGTTTATCATATCGAAGTAACAGTCAATTCGGACGGGTCTGACATTGAGCTTGAGTTCACTTCACCTACTCACGAGTCTGTGACGCAGAGCATCCCAGTGGTGAACAGCAGCGAGCGGGACTGGACGCTGTATGCGAAAATTGAAGGAGAGGGCTTCTATGGCCCGGGCGAATTGCATTGCCCGAAGCAGACATCGATGCCATATGCGCTGACGTTCAAGCCAATGTACGAAGGAACAGTGAAGggTCAGTTACGGTTGATTAATACAGTAAGTGGGACAGAGACAATTTTTCTGTTGCGTGGAGAGGGAAGAAAACCGTTGCAAAATGGGCATTTAGATTTGGACTGTGAAGTGAAACAATCCAAAACCTACGAACTAGAGATACCAAACGCGACGAACAAGAAAATGGTTTTCCAGaccTTCTGTGACCTTGATTTCGTCAGCGGAGCACCCTTTGTCGCAGTTCTTCCAAAGCAAACTGCAAAGTTTACCATGACACTGAAACCTTGGAGAAGAGGTGTCTTTGATGGGATCATTTCCTTCGTCTCAGACGACGAAGTTACAAAAAAGCTAGGCTTAGACCGGTga

Transcript

BRAKERMNPT00000003966

Protein

BRAKERMNPP00000003966.1

MGTDVVIEGIRVNPPVVEFPDIESGVVYQTQITIQNFGKVSRRIRFNSPSSEKFQLHCKNPDKVIAPGLEVSVLIEFCSQQQEDHESNFLLLVDEEVIQVPLTALAPKPAMEISGPVDFGTIIADGRILRQEIAILNRGSKNGAFKLTYTGMEPLTIVPKQGIVKAGYSQPIRFEFISKKPGHMEECISVMMEGQPPCEVHVLADIAKRSLLLLSMDTEERVNHVEFGQAYYGTDVLRSCVLFNQSPDPVSFVVILEEGGEGQELGVDLSVTKSTAFLTTNKKSRRYEDNDLTSLVTASPTQGTLAPYDKRLLHFKFSPRCSKSDQGWLSSDKSEPRRDYAVFVHIDIVGNIVKLDGKTTPTEANESRVEVALTGTALPVSLSVLPSPTIEFDNCSVGSSLDGRVTIRNDSPDLPVAFAVPKSAHFVPFPHADCLDPNGFMELLISFRPNQIGNFKPKMNIVVLGYTVEIGGDFGSLPKFKQKAIFKYPLQVSGVSLPVVGKKTAKSLSAQGRLLPQEENDSSTNLVLSGMGTSLRVFSSDDTNAGMIRSKASGVSTGKDCKKLSTDLPVVTAGPDDRATSIRPSNKKEKIVTQFTKTERYTYVDPDYEYSFEEEEERRFHRQKYVDYIQKLRKQKAEREKALLHGRRVIPIKPEKQLLTSKSLEALQRSAATKKVADGLKALPTTAVEKTDCSKVLSPKELYQIVLEPKFVDFGEVCAKSLASKKMKIVNSLSSHIFVKAEIDCRELRQTSPLSQVVPPGSVAALEFIFESNTLGKFERSVSYSINGHHKAHVIVLAEVVTVALSLSCQEVSVSPAPGLPPEAGMRKTVTLCNNRNMTAEFSWAPVVGKDGTAFSVRPARGTVNPNSSLECEVVFYPSYFAPLTGLFHLNVEGGNQLELHTNAEIPSTSCSFVEHRVMFGAVPLNLVTTRSAFLKNTSQSHAYFKVVDQSPIPGMTITPRTGVVPVGGTAELLVNYKPLTVQKFDTQIEVAVRGWKPIFLRLGGHVEPPCVDIDMESFQFGGVYCGAKATIPFKLKNLARSRAKIAFDLSRQRDFLLTFGESGDAGQEIPDAEGCFEVGLIGQQELQCFLEFNPAEVASYDFIIPAVINQTIAPTPPPSPYPASVAMSKPGHISADFDRNESKRVVQFPTPSRRVQGTALRAPLQVSSTEITYHLPSGYLDMGIQTSAGRAAGIMLVNNSSTQLTWHLDLEKAGPFFVDGTFQVLHRSGSPFQLTREGRAVTFPEITMYSGETSQLGILFSPKDPGIYEANVPVILDDDIAHPYRIIHLHGELEAPSIRFDPGAIHFFPTPLRTKTTMDFYLIASGYRRAVAVQCVIPEVELEDGSELQVLNVTFPNGNVIQPCCQDFGEKEPFKVLCQISFESPKPVSFSTAIEFVTDQHRHQLHVMATADNCILSCFKFLAVHQSDFHIICEELPGKEGVPGIASKKEGIAYGDAMLVPCVTAIKSPTENSNITTSTSFGLSVSTYPESSISSSTARSPIEDHKEEEEHEETTIPYEYCGTEDTAETEEEKYLKDVMKSVQRWYSSQAWSTGPSPITLPFSLRACFGPGLDDGGTTRAGIWSREKKKENKTVFDVVTHLCGKTIPGIPINASVPTEPFERTKHLHWMYATLLTFLRCQGAMVASILPEYLLDKEDFKRLVLMRDSEMSSAGVRFSARSLEREQEKYEFLSKHSWTDLLLQIIKVLVLNRITPQQYRKIALPSKDALLPVLNADPLSSNVFSVGERIVLSWVNYHYQHQRLAGLWKTSIDGKTPSSRWIVNFENDFLDGLVLASLIAAHAPFIVPEFFHSMYTHPTTAEQCLHNALKVVGAVRYLGMDYDVVATDITEPNPISILMLCIYLYHRLPHYIPRSKIEFNGPLHTDVTKEVKLQNPSTKPIVYQIIIAGEHGADFHSPTGRTIKVPPKGHVMLPIEYRSRFLRACSAILILVGRRVGSQVGSTLVFNLVTSVNNITPMAVIKTDSPCYELKKINIDVKNPFNKDADFKIILVEAKPNALAPSPQAKKKTKHSSLKKVESKIDHGIKRKPDLKKNESLVESNPSANKVEQAENVEMSISAFWCPAKTIHVAPFGTASLEVQFLPFSLGHRQCSVLFLNEDVGELVYSIEAEALLPLPASLPYQPSSHSVRVSSAAAAERSRGLFGGDDRVVYWQCSVGDEIAEEVLLPVVNEAKENALVVAARQRMSEKELRRREITGSLSVATIANALQSMGLSSESLAVTSPCSLAHESENIHFTVEGNSKFFKLPKSCNMTVSVNKRNDNDNAKLPVGFVPDGPGHYQCRVILRAPNDIRVYHIEVTVNSDGSDIELEFTSPTHESVTQSIPVVNSSERDWTLYAKIEGEGFYGPGELHCPKQTSMPYALTFKPMYEGTVKGQLRLINTVSGTETIFLLRGEGRKPLQNGHLDLDCEVKQSKTYELEIPNATNKKMVFQTFCDLDFVSGAPFVAVLPKQTAKFTMTLKPWRRGVFDGIISFVSDDEVTKKLGLDR

Uniprot

Uniprot term	Description
A0A0G2JEB6	Cilia and flagella-associated protein 47 OS=Mus musculus OX=10090 GN=Cfap47 PE=1 SV=2
Q6ZTR5	Cilia- and flagella-associated protein 47 OS=Homo sapiens OX=9606 GN=CFAP47 PE=1 SV=5

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14874	PapD-like	Flagellar-associated PapD-like	Domain	Interproscan
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45912	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005929	Cellular Component	cilium	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25552	CFAP47; cilia- and flagella-associated protein 47	-	Cilium and associated proteins	ko03037	deepkoala