Gene detail

Detailed information of BRAKERMNPP00000005336.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: CAB3978306.1, Rho GTPase-activating 20 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERMNPT00000005336

ATGAGGGTTGTGAACAAGAGAAACGGTAAATCGGCACTCAAGAACAGCCCTGAATCCACATCGACCCGTGCAATGTGGAAGTTCATGTTGAAGAGTATCAGTTACGGGCCATCAGATCGTAAAGTTTATGATCCTTCTTCCAGCTTCTTTGGCCTTCCGCTTGGACAAGTATCCGCAGACGAAGACCAGCTTCCTACACCAGTGCAGGATATGTTAACCGAACTTTTTCGTCGCGGCCCTTCCACGGTGGGAATATTCAGAAAGTCTGCTCTGATGAAAAGTGTTAAGCAATTGCGTCAAGAATTGGACGAAGGGAAAATAGTGAATTTTGAAGACAAAAGCGCGGTGGTTATCGCAACAGTGTTTAAGGAATTTCTTCGTGGTCTCCCTTCTTGTGCTTTTGGCAGCGAATTTCTGAGTGACATGCTGGACACCAATGACATAGCCGACCCGAATGAAAGGGTGGCAGAAATAGACAAgAATTGCAACAAGTTGCCAAAGTTGAACCAAgtattgataaaaaagtttttctgtGTTCTCTATCACATCGCTCGATTGTCGGAAACGAACAAGATGACCTCGCAGAACCTGGCGATATGCATTGCTCCGAGCCTCGTTTGGGCCAGCAAGACCTTGGTGGCGTCTAGCCCGAGGGAGGCTACGTCAGCTTGCGAACTCGTTCAATTTATTATCGACAATTTCACTACGATTTTCGGCGAGGACGCGACCACAATTCTCGGTGATATCTCGGAAATTCAGCCGCCTGTCGTGTACGACGACGAAGAAATGCCCGAGCAGGGATCGGACACGCCGGATGCTGTGCGGTCCAGTCCGACGTCAGAGGAGCTGAGAGCCAAAAAGACAGGATTTACTTTGTCATTGCGCGTACCCGACTTACCGGTCAGCCCAGACATGAGTCCGACTTCTCCAGAAATCGACCGGAAATCGAACAATGCACCCCATTATCAGAATGGCAGTCGCGTAGTATTTGGTCTTAAGAAAGAAAACCGGCGCCACTCCGAAAACGACCTAACGGACTATAACGACAATTTCCCTGTCCAAAAATTGAGAGCGAAGGTTCCACTTTCTTCATATACCACAACAGCTGAACTGATCAGACATCGGACTACCAGCGAAGACGATAGCGGCGAAACTTCCCCGACTGTTATCAAAATTGTCAGTACAACTAACGAGAATTCGCCACCTGTCAACGGGAGACGAAAAAACTCGCCTTCGAATCACGCGATTTATCACCGAAAAGTCCGGCCGACACCAACATACGAAGAGGCAATTAGACAACTGCGAAGAAATGCACAGTTCTCACCTACATTTACAAGAAGATATGATCGAACCATCGAGAGTTCCAACGAGAGCATCGACCAGTCGTCGGACGAAAAGAGATACGACATCCCCAAAGTCCCGAAGAAAGTCACCAGTTCGCGCGTCGATACCGCCTCACGACAGAAGGGAGCAACTGATGTTCCCGTGTTTCGCGGGATGGCAGAAAAGGAGGGGAATTACCCGAGTTCTCCGGAGACGCCGTCTGAACCtaaaagaaaacttgaaaCGCAGAAATTCGCTTATCATTTAGGGTCTCCTGTGTCGGACAGACTGAGAACGTCAAGATACACAGCCGAAGATTATCGTCGTAAGGCCCCGAATGAGGCGTTTGCAAGCCCGGGAAGTTTGCGCAGTCCTGTTTCGGCGTCGTCTTACGAGGAACATTTGCTGCGTCGCAAACGGTTCGAAACAGCGTATCTACAGAAGATAAACCTCAAGCTGAGAGATGGAGATACAGGCAGAACTTCAAAGGGCCTGAGGTTGAACACGGAATTTACGCACAAAGGCGCACACTTCACGCATTCGTACAATGGAGGGGAAAGGGAAAAGGCTTCACAATCGTCTGGCCAAATGCTGTCGAGAAGTCTCGACTCAAAAGGCCTACGGACTTTGCGAATCAGAGCGGATAGCGAAGAAAGGCAGCGTGTTCCCCTTAGCAACGGTGTGCAAACATTTGTAACCGAAAGAAGGAGTCCCAAAGCCAATGGAACATCTGTCTCGGGTTCTTACAAAAGCGACCGTTTGAATGCGGCAAAAGGCTCGCCTAGTGTATATGTAAGCACCCCGTCGGACACATCGGACGATACGATGAATAGACAGTTGCCCTCGTTACGCGAAGCAATCGAGACGGGGGCTTTCATGTACAGGAAAGATGACGCAATGAAAATAGACTTGGATGAACCGTTAGAaccaaacaacaacaaccttaCACCGGAATACTCTGTTGAACAAAAAGTTAGTGACAGAGcagttgaaaaatttgatcaaatacTAGCTGGACTGAAAGGTCGTGATGACGTAAGCAGCAGTAGCAGTTCGAGTTCAAGTGACAACGTTGCCGCGCTGGATGTCCCATCGCAAGAAGATATTAAGAATATTCTCTGCCAAGATGAATCATACGTCTAG

Transcript

BRAKERMNPT00000005336

Protein

Uniprot

Uniprot term	Description
Q6REY9	Rho GTPase-activating protein 20 OS=Rattus norvegicus OX=10116 GN=Arhgap20 PE=1 SV=2
Q8N103	T-cell activation Rho GTPase-activating protein OS=Homo sapiens OX=9606 GN=TAGAP PE=1 SV=1
Q6IFT4	Rho GTPase-activating protein 20 OS=Mus musculus OX=10090 GN=Arhgap20 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000198	Domain	Rho GTPase-activating protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23179	T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20641	ARHGAP20; Rho GTPase-activating protein 20	-	Membrane trafficking	ko04131	deepkoala