Gene detail

Detailed information of BRAKERMNPP00000010496.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: CRX73259.1, Contactin-associated protein-like 5-3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERMNPT00000010496

ATGTCTTCAAAGGAAAGCTTGTCAGGAAGAGGATTGAAAGCATGTTTCAGGAACTCTACCATCAACAATGAGAGTATTCTAGATGGGGATCATGTCTCACTGATAAATGCAGCAAGAGGGCCATGCCCCTTGGAACCCTATTTCAATTCTGTTGATTTCCCAATGAATGGGTCAAGTGTGTCATACAATTTTACCAATGCAGATATAGCAGTGCAGTTTGGGTTCAGAAccatttttgttaatcaaaagctattttataCATCACATGAAAGCCCCTATGATCCACACCTGAACTTGAAAAtggatgaaaatggaaaagtcAATATTGCATATGGAAGCATTCATCTAAAGTCTACTGTTGCAAATTTGAATGATGGTCTCTGGCACCAAGTTAAACTGTCACTTTCTTCATCTTTGCTTCTTGAGCTTAAAGTAGACAATCAAGTCTCAAGCGGTGTAGTAAAGCAGGCATTGGCAGTCAAAGATAAGGTATACTTTGGGTCCGATTTTGCTGGCTGTATGAAAAATATCATGGTTAATGGCAAGAAGCTGGAGTATTCTGACTTTAATGAATACAATGAAGAACAGCCAATAACAGACCTCTTGGGTTCTTTAGGCCCTACATTTGGCACATGCTCATTGAAAGAGCTGTGCACCCCAAACCCCTGTCTACATGGTGGAAGGTGTCAGCAAAGTACAGCAGCATCGTTTTCGTGTAACTGCTCACACACTGGCTATCTAGGAAGCGTCTGTAACAAGCCTCGCTATGGCAGGTCCTGTGCAGCACTTAAAGCAGAGGCTAAAGGCATCGTAACCAGTGGTGAGAAGAAAATCGACATGGATGGAGGAGGGCCACTTCCCACAGCAACGGTTGACTGCATTTATGATGGTGAAAAAGTCACAACAAAAGTGAATACAAAACTTGCTAGTGACTTGAAGCTAGAAAACCGTTTTGGCATGAAAACCGTAATGGTCCCATACAATGCAGATCGTAGGAGTTTGTTCTCTCTGACCAAAGAGAGCCTTAACTGTCACCAACATGTAAAATATGTCTGTACGAAGTCCAGCTTGTATAACTCGCCAAAGGGACAGATAATGGTGCGCTGGTTGGGCGCAAAGGACTACTATCATTACTACTGGGGAGACTCTAAAGGGAAAACCAATCATTGTCGCTGCGGCGTTTACGGAAACTGCACTGATACATCCAAGTACTGCAATTGCGATGTCCGCTCAGACAAAGAGGCTACAGACGAAGGTTTTCTTatcaacaaaaaacatttgccGATGAAGAGGATTGAGTTTCTTGACGTCAATAGTGATCATGGGTCAAAAGGTCGCTTCACACTTGGCCCTTTGACCTGTATTGGCGATGCATCGAAGGATAACGCGGTATCGTTCCGGGATTCAATGGCATTCTTGCGCGTAGAACCTACGTCTGTTACTGACTACAACAACGCAATGGATGCCATGACTGTCGCATTCAGCTTCAAAACGGTTAACGCTGAAGGAATTATGTTTTATGGCAAAAGCCGCAATTCGAATGACTACATCAAGATACAGATAGCTAGCAAGAGGCGACTACGAGGAGAGATCAACCTTGGCTCCCAAGCAGACTTCGTTGATGTCGACACTTCTGGTAGTTTTGATGACAACAAGCCCCATTCGGTTTTCTTAGAGTTCAATAGGAAAGAGCTAGCCTTTTCTGTTGACGGAGTAACAAAAACTGTCATGCGCAACCCATTTTCCATGAGCCATTTGGACCTAGAGGGGGAGCCAATGTATTTGGGAGGTGGTTATGGTATTTCGAACGGTTTTAGTGGCTGCGTATTTGGGTTGTTCATCAATGGGATGATGATTGACATCAGATCAACTGCCATGTATTTGGAAAACTATGGCGTGCATGCTGGCTGTGGAATTGGGTGCAGTAGGCCACCCGATGGTCCTTGCAATTATGGAAAATGCATGGAAGAGTATTCGTCTTTCAAGTGTGATTGTTCGATGTCACCtttcgatggaaaattttgccaTAAAGAATCGTATCCTGTTCACTTCAAAAACGACAGCAGTGTCACGTATGCGTTCGTGAAACCCGTTCAGATAAAGGAGGGAGAGGCGGTGCTGGCGTTCAAGACGACAAACAGTGACGGACTGCTATTCAGTATCCATGGTGACAGGCCTAACACTCACCTGTCCCTCGCTTTGAAAGATGGCAGCCTCGAGGCCTCCTTCAATTTCGATGCTACGTCTTCGAAGAGCAAAGTCATAAGACTTCAGTTAGCGACGATGAAGAGAAGGTTCGATGATGGCAAGATCCACAGTGTGAAAGTTTTTCACAATGTTAAGAAAGTCACAGTTGAGGTTCTTGACAAACTCTCATATGGACCAATGGAATTTTCTGCCACCAGCGGCAATTTGCTTTATGGAGTCAAGATTTCGGTAGGGAATGTAAAACCAGCCGTGCCTTTTGTATCAGGGTTGAAGAAGAATTTCGCTGGCTGCATGTCGGCttttaaatacaaatatcATGTCAACATGGCATCAAAACCAGTGCTAGTTGATGTTTTCTCAATGTATGGGAAGAAGGATCCATCTACCAAAGGAAATGCGCTTCTTGGCGCTTGTGGCAAAGCCCTTCCAACGCCAAAGCCGCTGCCCTATCTCATTGGAAGACCAACGACAGCAACAACCACGCTACGACCGTTCCCGCGGTTACACACAGTATCACGTGATATGACGCCAATAATCATAGGCGTCGCTTGCGGGCTGGCCTTTTTGTTACTTGTTATCTTAGTCTTGTTTTGTAAGCACATCAATCGTAACATTGGCGCGTACAAAACCAATGAAGACCGAAGGGTGTTGTCTTCTCGTGCAGAGACGTCATTTACACCCGTCCCCGATACTATGGATGGCACGAGCAGGTAG

Transcript

BRAKERMNPT00000010496

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02210	Laminin_G_2	Laminin G domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001791	Domain	Laminin G domain	Interproscan
IPR050372	Family	Neurexin-related cell adhesion and synaptic protein	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15036	PIKACHURIN-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07380	CNTNAP2; contactin associated protein-like 2	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala