Gene detail

Detailed information of BRAKERMNPP00000011707.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: XP_047136420.1, kinesin-like protein KIF28P [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERMNPT00000011707

ATGGTTGGAGATAGCACACTGATAAAGGACCCAGAAAACCCCAGTGCCGAGCCACGAAAGTTCACCTTTGATTATAGCTATTGGTCTCATGATGGTTTTAAAGAACTTGCAGATGGGTACCTTGAGCCTGATGACCCCAAATACAGTGATCAGAAAAAGGTGTTTGACGATCTTGGAGAGGGGGTTCTCAACAATGCATGGAAAGGATATAACTGTTCTCTGTTTGCCTATGGACAAACAGGATCTGGAAAATCATATTCAATGGTTGGATATGGAGCAAATAAAGGGATAGTTCCAATCACTTGTGAGAGACTCTTTCAAGGTATTGATGctaagaaagaagaaaaatcagATAAGGAATATCAGGTTGCTGTTAGCATGCTGGAGATTTACAATGAACAAGTTAGAGACTTGCTCAACCCTGCTACCCTGAAAATAAAAGGAGGCCTTAAAGTGAGACAGCATCCAAAGCTGGGATTCTATGTTGAACAGCTTACTTCTCGACCCGTCGGAAGCTACAAAGATATAGATGCCCAAATCGAATCTGGCACAAAAAGCAGGACTGTAGCCTCGACAAATATGAATGCAACCAGCAGTCGTGCCCATACGATCGTGGCTATTAGCTTCAGTCAGAAAGGAGCCAACGCGGCTGGTCAAAACACGACGACGACGTCAATCATTAATCTCGTAGATCTTGCAGGAAGTGAGCGAGCTGATTCGACAGGTGCTACAGGCGACCGCTTGAAGGAAGGCTCTGCTATCAACCAATCACTGTCTTCACTGGGAAATGTAATTAAAGCACTGGCTGATCAGAGTATGGGGAAAAAGAATGTAATAGTTCCCTTTCGTGACTCGGTTTTAACCCGATTGTTGAAGAATGCCCTTGGAGGAAACAGCAAAACTGTCATGATTGCAGCGCTCAGTCCAGCTGATATTAACTATGATGAGACACTTTCAACACTAAGATTTGCTGACAGAGCCAAAGCGATCAAGACGAAGGCGGTCGTTAACGAAAGTCCCACCGAAAAGCTTATCAGAGAATTACGAGAAGAGAATGAACGATTGTTGAATGCACTCAAAGCTGGTGGAATCCCCCTTGAGCAagaacaacagcagcagcagcaacagcaacaggCAGGAGTCTCAGAAGAAGAGGTAGAGGAAATAAAGAAGGAAATGGAAGACAGGCTGCGCCAAAATCAACTTGAGATGgaggaaatgaagaaaagctGGCAACAGCGGCTTAAAGAACAGGAAGAAGCCTCGAAGGTCCAGGTAGCTGCCGTGAAATCGGAGCAGGAGAAGCGAAAGACTATCGCACACTTTTGGAATTTAAACGAGGACCCTCAACTAACAAATATGGTAGTTCATTTCGTCCCTCCAGGTTCCTATCATATTGGCAATCAGAAAGCTGACCCACCACCCGAGATAGTGTTAACGGGATTGAGCATACAGAAAGCTCACGCGTCGATTGTGCACGATGACAATGTAATCAAGATTTCTCCCGGCTCTAATGCTAAAATTGTCGTAAATGGAGTTCAAATCGTGGATGAAACGATGCTACACCATAGTGATAGAGTAATGTTTGGATCAAATCACTTGTATGTACTACACCATCCCCATGACCCTGAAATATTGAAGAGAAAGGAAGAAGCTCAGAAAAGTGGAGCTGCTGAAGTTGCCCCTGAAGAGCCACCAACCTACGAAAAAGCGCAGGAGGAAATTGCTAAGAATTCTGGGTTTTATGGTGGCCTTAATGATAACGAGAAGTCATCAAAAGATGACTTGATTCTGCAAGAAGATTTACTAAAGGTATTGCCAATGATAAACGAAGCAAATGCGATGAGTGAAGAGTTGAATAGAAAGgtCTCCTTTGAGCCTGTTCTAATATCACCACAAGCAAGAGGACTAAAAGCTGGCCGCACGGAGGTAAAAGTAAAGATGAAGAACCTCACAAACGATAATGAATGGCTATGGGACAAGAATAaattcatcaacagaaagTATATAATGCAGGAGATGTATCAAAACTATATGGACGGTGATGAATGGGATGTGAGCCAGGAAAGAGATCCGTTTTGGGAACCTGCTGATGCAGATGTCATGATTGGTACAGTCCATGTTTACCTTTCAAGTTTAGGCTTCAAGATTGAACTGGAAGAGAATCTTGCCATTGCCGATTTCAAAGGAGCTGAACTTGGCCATCTTAAGGTAGAGGTTGAACCGTGCAGCAAAAATGGCTCGTTGCTAGATGACGATGACTTTCTTGAAGATCCTAGTGAAATGATTGGTGGAGACTTGAACTTCAAAGTTAAAATCCCAAGTGCTAGAGGAttgccacaaaaattttccaagGGTGAAACGTATTGCCAATACAAGGTATACCTCGAAAAGGAATACAATGTGACAGACAAAGTAAAAAAGACGATTAATCCAGACTTCAACCATTCAAAGCTGTTTTCGTTCTCCCCTGTCACAAAACAGTTTTTAGACTATCTGCTGCAACAGCCACTTGTAGTGGAAATCTGGGGAAAACAGTCTGATTCGATGGACcccaacaacaacagcaacaacaaatcGAAACGAGAAAGCATGAGCACAAAACAGCTGATGAATGCAAATAGCGTATCGAAGGCAAACGTCATCAACACATCACCAACGAAAGATGATGACaataaatacaaaactatGAGTGAGCTCAATTCCTTGAGgaaaagaaaccaaaggctgAATAGCAGAATGGCCCGTTTGCGAGAATTAATAGACAAGGCAAAGGCCCAAAACCAGAACACCTTAGACCTGACAAAGGTGGACGAGATCGTTAATGGCACAGATGTCTCTGACCTTCGTCGTTTTAAGGCTGCGGCGGACGTCGTGAAAATCACAGAGAAGGCAAAGAAAAGCAACGAAGGAAAAATCACAAGCTCTGCTTGCGTTTTGCAATAA

Transcript

BRAKERMNPT00000011707

Protein

Uniprot

Uniprot term	Description
D3YXS5	Kinesin-like protein KIF28 OS=Mus musculus OX=10090 GN=Kif28 PE=3 SV=1
F8WLE0	Kinesin-like protein KIF28 OS=Rattus norvegicus OX=10116 GN=Kif28 PE=2 SV=1
B7ZC32	Kinesin-like protein KIF28P OS=Homo sapiens OX=9606 GN=KIF28P PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF00168	C2	C2 domain	Domain	Interproscan
PF00498	FHA	FHA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR000008	Domain	C2 domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan