Gene detail

Detailed information of BRAKERMNPP00000014982.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: XP_002167125.3, kinesin-like protein KIF3A [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERMNPT00000014982

ATGACGGTTAACAAGGATTCTGACAATGTCCGTGTCATTGTGAGATGTCGCCCAATGAACGATAAGGAGAAGGAGATGGGCACAAAAATGGCTGTAAAAGTGGATGAAGTGAGAGGCTCAATAACTATAGGGAGTCCTGGGTCAAACTCATCTGACCCTCCAAAAGTATTCACTTTTGACAGAGTATTTGCTCCAAACTGTAAACAAACTGATGTATATAATGATGGTGCAAGACCAATAGTGGAGAGTGTTATTGAGGGATACAATGGAACAATATTTGCATATGGGCAAACTGGTACTGGAAAAACGTTTACTATGGAGGGTATAAGGACTGTTCCTGAGTTGAGGGGAATTATTCCAAATTCATTTGCACATATTTTTGGctttattgcaaaaatggaTGAAGATGTAAGGTTTTTGGTGAGAGTCTCTTATCTTGaaatttataatgaaaatgtCAGGGATCTGCTGGGAAAAGATCAGAAAGCAAAACTAGAGGTTAAAGAGAGACCTGACATAGGTGTTTATGTCAAAGACCTTTCATCATATGTTGTGAATAATGCAGATGACATGGATAGGACAATGACAACTGGAAACAAAAACAGATCTGTTGGTGCAACAAATATGAATGCCACATCTTCTAGGTCACATGCTATTTTTACAATAACCATTGAAAGGAGTGAGAAAGGCCTCGATGGGCAGCAGCATGTTCGAATGGGGAAGCTGCATATGGTCGATTTAGCGGGATCTGAGAGGCAAGCCAAGACGGGGGCTGCTGGCGATAGATTGAAGGAAGCAAACAACATCAATCTTTCGTTGTCAACGCTCGGCAACGTCATTTCTGCTCTAGTCGACGGAAGAAGCACGCATATACCTTATCGAAACTCGAAGTTGACAAGGCTTCTGCAGGATTCTTTGGGAGGAAATTCTAAAACAGTGATGATTGCGAATGTAGGACCAGCACATTACAATGTTGATGAGACAGTAAGCACATTAAGGTATGCAAATCGAgctaaaaatatcaaaaacaagGCGAAGATTAACGAAGATCCAAAGGATGCTTTGCTAAGGGAGTTCCAGAAAGAGTTGGAGAAACTGAAGGCACAACTAGCAGAAGGTGGGGAAATAAGTGGAAGCGGCGAAGAAGATGAGGATGAGGGGCCTGGAGAAGATGGAAAGCCTCGCAAAAAGCACAGAAAAGGCACAAGATGCATGTCACCAAGGGAAGTCGCTAAGCTGCAGCACCAGATTGAGGTCGAGCGGAAAAGCCTTCAAGAAAAGACCGGGTTGGCACAGGAAGAGCGGGACAAAGCAGCCAGCGAATTGGAAAAGCGGGAGAGTGAGATCTTGAAGGCCCAGGAGGAGCAGAAAAAGCTTcaggaaaaattgaagtcCATTGAGTCGAAAATGATTGTTGGTGGAGTGAACTTGTTAGAAAAAGCTGCGGAGCAAGAGCGTCTCCTAGAAGAGTCTGCGAAGGAGATGCAAGACAGGCACGCCAAAGAAGAGGAGCTTCGAAGAAAGATCGAAGAGCGGGAGGCTGAAAAGATTGATATCGAAGAGAAGTACGCAAGTTTGAAAGAAGAGGCAGTGGGGAAATCAAAAAAGCTGAAGAAAGTGTGGAACATGTTGATGGCCGCTAAATCAGAGGTTGCCGATATGAGAGAAGAACACCAGCGTGAAACCGAGGGTCTGCTTGACAGCATCAGGGAAACCAGCAAAGAGCTGAAACTGCTACAACTCACGATGGATTCATACATACCTTACGAATTCCAGGAACTGATTCAAAGACAAGTCAGCTGGAATGAAGAGATTGGAGAATGGCAGCTGAAATTCGTTGCCTATACTGGCAACAATATGAGAAAGCAGTCGCCTGTTCCTGACAAGGGGAAAGAGGTGCCGGAACTTGACTTGTCTAATGTCTATCTGACGTACACACCGGGCCTACCACCAGAAGCAGCTGATAAAAAGCCATCCAGACCCAAGACTGCAAAAGGAAAGTCGTCACGCCCTAAAACTGCGAAAAGGAAATCTAAATCGAAGGAAGTGGAAAGTGCGGACTTCCAAATCGACGATGCTGAAGTTTACCCAACTTCCAGGAAATCTATGAGTCCGCGGAAAAATATTCGGTAG

Transcript

BRAKERMNPT00000014982

Protein

Uniprot

Uniprot term	Description
P46872	Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus OX=7668 GN=KRP85 PE=1 SV=1
Q5R4H3	Kinesin-like protein KIF3A OS=Pongo abelii OX=9601 GN=KIF3A PE=2 SV=1
P28741	Kinesin-like protein KIF3A OS=Mus musculus OX=10090 GN=Kif3a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47969	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005875	Cellular Component	microtubule associated complex	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0051231	Biological Process	spindle elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10394	KIF3A; kinesin family member 3A	-	Cytoskeleton proteins	ko04812	deepkoala