Gene detail

Detailed information of BRAKERNUSP00000001128.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029197476.2, tectonin beta-propeller repeat-containing protein 2-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000001128

ATGAATGAAGTCCTGGATTCCTTACCACTCCAAGCACAATTTGGCCATAAGAACTTAATGGGTCATGTATGGGACAAAGCTAAAGAACATGGAGTAAAGAATCTGTTGCACTCATTAAAAGAGCGAGCGTACGAGAACACCAAAACCCTGATAGTTGAATACACCTGTCTTGATGTGTCACACGACGTTATTGTTTTCGGCACAAACGTAGGAGTTACCTTTCTATATGATCGAACTTGCAAGAGGCTTATACGGCTACCATGTGAGGTTACTAATGAGCCTGTTAAATGTATCCGACTTTTGCCAGCTTATAGTTACACAGCTGTTGGTTTCAACAGTGGATTAATCACTATCTTTACTTTTGTATTGGTGTCTCAAGGATTTGGAAAGCCTCAAACCATGCATATCAGTGGAGCGCATAACAGTGCTGTGACCTGCCTGGAATGGTCTCCTGATGGTGAACTACTCTACAGTGGGGACAAACAGGGCAAAATCTATGTTACAGTTATCAAGATTCAAGAGGGACTGACTCAGACTGCTTTGATCTTGCAAGAGCCATCTTCAGTTGTTCAACTTTCTTATTCATGGAATGCTCTTTTGATTTCAACCGAGAAAAGGACAATTCTTTGGGATTTTCgtcatgaaaaaattactcaagttggccaaaaagaaagaaaaagCCCTGGATCCTTTGGTGCAATATTTTACCCCCCatcaacacaagaaaaggagaAATCACCACCGGATGTCTACACCTCCAGACCCGGTTTACGGCTTTGGATTGGTGATGTTACTGGCAAAGTGTCTGCGACACTTATGTACAAGGGTTTGACCAATGACAACCCCCCTGGCATCACAATAATGAACCCTCAGCCTGTCTGTCTTAGTAAACTTCCAACAGACTTTCAACCCCAATTTGGTCCACTTAGACTTTATCATGGACAGTTTTTTGTGACATGGGATGTATCTCAGCTTTGGGTCCTGGACACTTCTCCATGTGCACtagttggttaccatggcaatcTTGGTGACATTGTTGATGTCAGTACAGTAGGCCACGAAATCTATGTTCTGCAGCGGGGAGGGGAAAGGCTGTTGATAAAGCTGTCATTGATTCCAAAATTAAGAAATCCTCTTGTCAACGTTGTTGCCCTCCTGACGCACAGCTACAAAAGCCAAGGAGATGATACTTTGAACAGGCAGCAAGAGAAAGGACCCCAAAAACAACTGGAACCCATCAATGAGGCCACCACAGCTGCGTCCGTTTGCCTTGAAACTGCCGACTTACCCTTGGCCGATGCTTCAGAAACATTAAATGAGAAAGACTTGTTTAAGAAGTATCAAGATATCAGACATCAAGATTTTGGAGAAATCGTGTTCCGCAAACAAAAACGATCCAAGAAGAAAGCAAATAAAGatCAATTTACGAAAGCGGTGTTGGATTTGCCGCAAGAGAAAGATGAATCATCGACCGGCGATATCTTACCTTTACCTTGCCATACTGACAGTCATGTCTCTTCTGACATTCCTGACGGACCCGATCCTTCGATCAAAAGGTTGTCCAATATTTCCTCTGAATTTGACTCTGGTGATAAGTGTAGCGATACATTGGGAGAGGGGGAAGCAACTTTGACGATTGTTCACGTGACGCAAGAAGGTGTCGAAGAGAGACGTGTATCCGGTGATTTGACTTCTCCGACTTTCGAGTCGTTGCCACGAAATGGAGAGTTTCACGGAAGATCCCAAGCTAGTGATAGTGAGACATCGCCTGCGGAACCAGAATGCGTAAAGCTGTTAGAAAGGACAAAGGAAATGAGTAAAACGCTGTCACTAGAAAATATCGTGTGCACGGATTCAATTTCCCACTCAACAAGCTCTCTAGTCGAAGGACATATTGCTCCAGATGATTCAACATTAGGACAGGAAAGATCTTACCAAAGTGACTATTTACCGAAAATTTACTCGGATGTTTCGGTCGCTGTTTCCGACGGTACATTATCCGATGCTTCGGTTGAAAAATCTCATTTGTCAAAGATTAAGTTCGGAGACACCAGTGTGTCCATGGTCTCGTCCTCACGTCGGAGAGGAAGCAGTGACGTTTGGACGGACTCTGAGGGGACACCACCCGCGTCTTTAGATTCGGATGGTGCAGAGGAACTCAGCGATACTGCGTCGTGGCCCAGGTCTCCTTCCAGGAGAGCAGGGAGCGATCTTGAAATAGGGTACCCTGAAGACGGACATCCTTTGGAAGGATCCTCCTCGTCTCCTAGTTCTGGGTCCTCGCTTTCTCAGTCCCCTGGCTCAACTCAAACCGGTCTGCGCATGCTTGCAGATAGCTGGGCGGATTATTCCCCACCGGGGCAGGGCTACTTGCAGTTCCTCGCCGTTTCAGACATACATATTTGGTGCGTTACAAATTACGATCTTATTTTTTACTGTCCGACACATTTCTCAGTAGTAGCGTGGACTCAGCTAAGAGGATCAGCGAGAATGCTAGCTGTCAGTCATGCTGGGGACGTAATTTGGAGCATTGATCGGAAAAATTACGGATATGTTCGCACAGGAATTTCCACCAATCATTTGACGGGGAAGAAATGGCAGCCGGTGGAGAAGGATATGCGATACGTGGCTATTGATCGGTCAGCAGTCTGGGGAATAAAGttAAACGGTGACGTTTTTGTGAGAACATGCGTAAGCAGAGATTGTCCGACTGGCAGAGGCTGGCAAACGATCAAAGTGGATACACAATATTTGCAGGTGTCGTGTTTTAATGGACTGGCTTGGTTTTTAGACAGGGTGGGACACATTGATGTATACAAACATGAAGGAGTCAACGTgccaaaatcaaatgaaaaatgGGAAACAGTAAAAGATGTCTTGGCAAAGTGTGTTTGCCTGGGAATCGAAGGCGTGGCTTGGATTGTGGACATGAAGGGTTTAATTTGGTTCACTGACGTAACTCGCGATACTCCAACTGGCAACACGTGGTATCAGGTCTCTCTAGGCCAGTACTTGATGCAAAATCGTAGTTTACTTGAATCACTGTGGTCATGGGTTTTGCGAGATGACGTCAAACTTTTAAGTGTTAGTCCAAAAGCGGGAGTCTGGTTACTAGGCTCGGGAGGCTCAATCCAGGCTTCGCACGGCCACTTGCTTGGAACTCGCTGGGATTCACTCGCACCACAAGGCATTGCCCAATCAGTATCCTGGTCGTACCTGTCCGTGGGTTCATTCAAAGGCGATTTGGGTCACGTGTGGGCTTTGCAACCAAACGGAGAGCTGATGTGCTTCCAGCCCGGAAAAAGACCCGTCATTGTAGAACCACCGCACGGAAAAATATTGAAACTAATTTCGGCATCTTGCAACAATCTCTGGGCAATCACACATACTTCAAGAGTCGTTCAACGCACGGGAATTTCCGATACTTGTCCGCAAGGTTTTGGTTGGGTGGAGCTGACGCTAAATCAGTTCGGCGTCGGCAAAGTCATCCACCTCAGCTGTGGCGCACTTAGCACATGGGCTGTAGATAATGCGGGCAACGTCTGGCTACGGATCGGAAAGGAAGATTCCGCAGATCACACCGTTACGCAGGTTTGGATCCCGGTAGATGGGAGCCCCCTATCGGGATGTCGATTTGCTAAAATAGCCGTAAGTCCCGGGGATCGTGTTGTGTGGGCGGTGGATGATCGCAACAATGTTTATGCGCGCCGTGATGTCACGCCAAGCTTTCCTATAGGTACCTCTTGGGAGATGGTTCCTGGAACTGGAGTGCGTGACTTAGCCATTAGTGAACACATGGTTTGGGCTACTTCCCCTAACGGTGATATCGTTTGTCGCTACGGGGTGAGCAAGGACAATTGTTTGGGTTACTACTGGAAAAAGGTGCCGGGTAATTTTGAACTGATTTCGGTAACTCCAGATGACGAGCTCTGGGCTATCGATCAGAATGGACAACTGTTTCGCCGTAAAACACAACATTTTTATGGAACTCAGTCACCTTTCAAGCCGCGAACTTATAGCGCTTTGTTCTCTGGCGAGGAAGACTGGGAATTTATTTGA

Transcript

BRAKERNUST00000001128

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O15040	Tectonin beta-propeller repeat-containing protein 2 OS=Homo sapiens OX=9606 GN=TECPR2 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005793 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF19193 all species →	Tectonin	Tectonin domain	Repeat	Interproscan
PF06462 all species →	Hyd_WA	Propeller	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR006624 all species →	Repeat	Beta-propeller repeat TECPR	Interproscan
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23287 all species →	RUBY-EYE2-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032527 all species →	Biological Process	protein exit from endoplasmic reticulum	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23881	TECPR2; tectonin beta-propeller repeat-containing protein 2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.