Gene detail

Detailed information of BRAKERNUSP00000002718.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029198110.2, uncharacterized protein LOC114963116 isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000002718

ATGACAGACTACCAAGTGTCAACAAGTCTTGCAGGATCTAGGTTGTCAACTCCATTCCATTTTAAAGACTTTGCGTTAAATACCAGTGGTGATGAGTCAGTCTTTCCAGCAAGTACATTATCTCCTCGCAGTGATTGTGACTCTTCGTCAGACTTGACGTCTTTATTATGGACTGCACGATCTACCAGTCCAAAAAATATCTTAGAGGACAACGCATTCGGTCGGTCTGTTGGCAAGGAAAATGCCACAGAATTCTCGGTTGGTCAAACATGTAGAATGAGATCTGCAGACAGTGGGACTTGGAGAAAAGATCATAGTTGGGTAAAAATACCGTTGACTGTTGCAACAAGTTCTGAAAAACAAGACAGAAGAAGCCCTTCCTTGTCAAGAATATTCCACATGGAGGAAAACAATACAAGGTTTATGCCAATAAGTACCACAGGTGTTAACTTACAAAGGTCTCGCACACCCAGTCCAGGAATGAGTAAAATGCTTCTGAGCTTGTCTGATCATGTACTTGAGTGTCCCTGCACTCCAAATGCATCCACGTTGTACAAGAACACCCGAACACACTGCAACCCTTCAGAGCTTGGACAACAAACTTATGATGAGTGCATGTTCTTTACCACATGGATCAACAAGCTTTTTAAAGAAAGCCGAGACCACTTTTTGATCACAGACTTGGCCAGAGACTTGGGTGATGGTCTCACTCTTCTCATCTTAGTTGAGATGCTAGTTGGAGAATATCCTCCACAGATCCACATCAAACCAGCCCTCGATGTACAAAAGATGGAGAATGTGCAAACATGCTTGGATTTTTTACAGCACCATAATGTCTCTGTGAACAACATCGCTGCTGAGGatATCGTCAAGGGAAGTCTTAAGGTTGTTTTAGCCTTATGCCATTGTCTCTACAGACATTTCACCTCGCATCAAGCAAACTCTCTAAGTCACAATCTTGAGGAGCAAGATGCCTTGGAATTGTTTGGCTGGGTATCAAAGGTAACAGGAAAACAAGTTACTGGTTTTCAGAGttttgagaATGGTACCTTGTTATGTCTTCTACTGAACAAGATTCTCGACAACGCTATTCCCGATTTGGTTTTGGAGTTTGGTTCTCCAGCTGAAAAAATGTGCTTCGCATTGAAATTATCAGCCGAGCGTCTTGGTATTGTGACTAGCTTAGAGGCAGATGATATTATCCTTCAAAGAGATAGAAAGAGGTTCCTTGATCTTTTAAATTCGCTGTACTTGGCTTACCCAAGCAAGACGGAGACAATTAAGATCGGTGATGCTTCAGAAAGCAATACTCTTAGAAGGGAAACGAAGAAGCTACAAATTAGAGAAGAGACGGTGAAAGATCGTTGTGGCTCCCAGTCGACTTATTTAAAAGAATCTACTGAAAATAGATCTCCATTTTCAAATGGACGACTTAATGGCTTTATTTCCAAAGAACCTCCAAGAGTGAGTTCAGAAATAGATGGCAAAAGGAATGGATTAAGCGACTTGTCAAAGACTTTACCAAATGGAGTTTCAAAAGTTGTGGAAGCACGAAATGGGTCTTTACGTGGCACAAAACGAGAACTTGACGAATTAATGGAAGACTTGCGACTTCTTCAGCTTGAGATCCTTCCTGAAAATCGTGTATGTGAAAGTCACTGGATAGACAAACAAAGACAGGATATTTCTATTCGCCTAAGAGACTCAAATCTTTCGCGGAAACCATCAAACCAACGACGAGAACCAGGAGATGTGTCCAGTGGCAAGGGCATTCTGATGCAAGGATCTGATAAAACAAGCCAGCTGGCTGCATTTTCGCCAAAAGACACCTTTCGTAATGATCAAGATGGTGCTGGCAAACTTCCATTTGGTGGATGCTATCTCTCTGAAAAACTAGAAAAttttaatgtcgaaagaaaACATGAGTTCTTCGAGGAGAGTTCGGTCTTCAAAGAGTATCAGGTTAAACCCTCGTTTCTTAATGAAACTGAGGCATTCAATCTGCGTAACTCAGTTGAAACCGTTAATCTGAAAGGGAATGATCCAATCCAAAGTTTCTTCGACGGAGAAGTCAACACAAGTACCCCGCAGGTATTCAGTTTCAATCAAAGTGTCTCAGAAAATCATAAGGTACCCCAAGAGTTTAACGTAGATACAAAAGGTATTAGCAAAGTGTTTGACGTCGAGTTTTGCGATTTAGATGCTACGATGAGAAGTGAGCAAGAGAACCGGTCGGTGGAAAGAATGCTACGAGTCATTCGTAGATCCAAGCTTGATACGTTAGGTGGTCTTACTAACGGAGAAGGAAGTTCTTATGGTGAGGGAGAAGAATCTCGAATGAAGCTCCCTGCAAAACAGAGCTTAGAGATGTTAAGAAAAACTAGGTATGGGTCAATCCCTGGACTATCCTCAGAAACAGCAAACGTTCATGGTGGAGTAGTAAGTTCTTCTCGTTCCCCTACTGGGAAAGATTGCAGCCTGTCCAAAAGTAAGTCAGACACTGTGCTACTTTTAAGTAAACAGAATACTACGAATAAACCAACGGTGGATATAGATTCTAGAGTAAGGGAAGCAAGGGATTCTGTTGAACCTTCGAGACATTTGCAGAGGACTTTTTCAAGGGAGAAACGTCAAAGGATTCAGTTTCCTGTGGAGAAGTCCCACAGATCAGCGCAACGTTCTTCACTGAGGGCTAATGCGCATGCTTTAACTTCTTTAATAAGGATGAGTGCCAAGAATGCGGGCGCTTCATTAAGCGAGGAGGATCTGTAA

Transcript

BRAKERNUST00000002718

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14315	Filamin-C OS=Homo sapiens OX=9606 GN=FLNC PE=1 SV=3
Q8VHX6	Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3
D3ZHA0	Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008020 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11915 all species →	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0030018 all species →	Cellular Component	Z disc	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0030054 all species →	Cellular Component	cell junction	Interproscan
GO:0030864 all species →	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0042995 all species →	Cellular Component	cell projection	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0055001 all species →	Biological Process	muscle cell development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000002718.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.