Gene detail

Detailed information of BRAKERNUSP00000004037.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029213423.2, ras-associating and dilute domain-containing protein-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000004037

ATGGGTGACATTATTCAGGGACAAGACCCGCAAGGGTTGTTTTCGAAGAGGTCGTCTTCAAATATCTTGTCCGATCCTCGAATTCTGGCGCATTTGAGGATTGTTGCCGAGGAGGCGCAAAGCTCCGAGAAGGAACAGGATGAAGAATCGGAACTGCAGAACACGAAACGGGAACTGGGACTCAAGATTGCAGCTTACAACAAAGGCAACCAACATGGAGCTTTCAGGGTGATATTGAAAGAGGACTTGAGTTTCGAAGGCGCGTTACGCTTTTACTTCGAGGATGGTAGGGAAAAATTGACCAAAGCCTTGAGAGTGACAAACAAGACGTTGGTTTCCGAGTTGCTTCCTACGCTAATTGAAAAGTTTAAACCAGATTTGCTGAATTCCGCGGTCGAGAAAAAGGCCAAACTTTACGAAGTCTACCAAGAAGatgaAATTTGTCTAGACCCCTCTGATGCCCCACTTGAAATTGCATTAAATGCAAAAAAGCACCCCAGATTTGTACTTCGTCTGGATTTAAAAAAGCCACCAGACCCAACTGCCAAAACAGATGGCCCAGAAACTATAGGAAAGGAAACGGTTTCAAATGGCACagctttgagtggacaaaaacCTGCAGAGCAAAGTCGCAATCCAAGCCCCAGTCCATCTAACGCCAGTGTGCATAGCATAGGAAGTGATCGTAGTTCAAGTAGTAGTTCTGCTGGGCCAGTCCTTGTGAGAAATGAGGGTCCTACCCTTGGAAAAAGTCCATTTACTAAGCCCAAAACACCACCACAGTTTCCCAAGACAGTACAGCAGCAAACCCCTTCTTCGCCAAGAATTTACAATATGAGAAACTTTTTAAGTTCACCCCGAAAAGGTTTCGGGATGTTTTTCGATGGAGGTGGACATGAGACAGATCAGAGTGCTCGAGCAGCACAAAAAATGGCTCGAACAAAACATAAGAGGAAAGGATCACTGGGCCGACttagaataaagaaaaaagaagctgCAAAAACTCACACTGAATTGTCAACTGAGCAACTGGCACCTGGTATTCTCAAGGTTTTTGGTGATCATGTTTCACCAGGGTCAAACTACAAAAGCGTGCGAGCCACTGAGATGACTACTGCAGATGAAATAGTTCAGCAGGCCTTAGAAAGGTATTCCTTAACGAGTGAAAAGGCATCAGATTACATACTATGTGATGTTATAGGGTACTTTACCAAGAAAATGGGTGATGTAAATGCTACAAACTCAGAGGAAGATGCAGATAAATGGATTGTCGAATATGCTAGGGTCGtcagcgacaaagaaaagccACTTGTGCTTCAACAATTGTGGAAGCCACTCAATGGCTTTTCTCGCAGGTTTGAATTACGGAAAAGGGTAGAAACACAGGATTCATCATTCTTCAAACCTAGAGGAAGTGTTGCGGTCATGAGAGCTGCATCAAAGCGTGAAGTGAATATTTCGCCACCTATCCCAGAACGCAGGAGAGACACAGGGGGAAGTGACATGTCCTTTCCATCATCTGCTGGGGATCATTTTCCAGGCACAAGTTTAGATGAGGTCAGCAGTTCAGGACGCGAATCTATGATTGCAACAGCATTTATTCCACCACTGGACACACCTTATCTTCTCCTTCTAAGAGGTGGTAGTAACCATGATGACATTTTGTACCACAGGCTAGATGATCAATTGACATTAGTTGGTTGTCCTGTGCATAACAAAGATAACCAATCTCCTGATATTGTACTTTTTGCTCCTGATGTTTTGCAGCAACATTGTACTTTGAGTAAGAAAGTAGAAACGCCAACTGGCAATTCTGAACTGGAAGACTACAATGTGAATTTTGCGGTTTACTTGGAGCCTTTTCGAGGTGCTGATATTTGCATTAATGGTTTGAAAGTTTCATCAAGTTGCAAGCTTAATCCAGGGGACTTGGTTTCATTTGGCAAACACTACCTCTACTTGTTCAAAGATGCATCACAAGTTTCTGACATGTCCATGAAGCTGACATGGTTCAGCAACTTAAAACAATTTCATAAGTTGCAAATGTCAAGGAATGGAGAGCTTTTACTTGCATCAAAATCTGACAGACCTAATGGGGCAGACATTCCAGATGAACCCGATAACAGATTACGACTTTTTTACAAGCAGCAAGATGAGGATGATTTGATCCATATGATAACAAGCATAGTAGATTTGTCATCGGATGGTTACAAGTTGTCTCCATCATACTTGTTACTTATGTGCATTGAGCATTCTGGGCGATATCACACAGAACTGCAAACACGACAGCTACTCATCAAGATATCCAATTCTATACAGAGCATTGCTTCGGAGAAAACTGCAGAAATGTCAAAAACAGTTGAAAGAACTACAATTCCGGAGAAAGCATTGGAAGAGCTTTTGCCTCAACTGAGACCAGTGGTATTTTGGATGTCCAATTGTTTGGAGATGCTTCCATTCCTTCAGACAAACATGTCTAACTACATCAAAGACCCTTTGGACCTTGCTTTCCAAGGTGATGACGTTCTGGTCAATGCTGATGAGGAGTTGCTTATGTTCCTCGAAGAAGTCGTGATTTATACCTTTCAGCAGACTGTGTACCATCTAACAAAgGTGCTGTACATTGCTCTTCCTGCCATCTTAGACACCAATCCATTCCAAGACGTGGACGAAGACAGCGAAAAGAAACCACAGGAAGTAGAGACTGTCATCAGCATCTTCCAAACCACTTATGATGTCGTAAAATCCTTCTTAGTTCATGATGACATTATCCATCAACTCTTCGCTTACTTGTTTTTCTTCACCAATGCTTCCTTGTTCAACACTCTGATGGAGCGCGGGGCTGGGGGCAAGTTCTACCGCTGGGCCAAAGGAGCGCAAATTCGCGGTAATCTAGATCTGTTAGAAACCTGGGCAGCGCAGGTGGAACTTCATGACGAGGCGAATGAGTATTTGAGCATTTTATCCACTGCGGCAGATCTGTTGGCCACGCCCAAGGTGCAGCTTTTACAGGCTGACTGGATGACCATACGGCGAGACTTCCCCGCACTCAACCCAGCCCAAATACAGCAGCTCCTTAGTGAATACCAACTCGGTCCAGGCAAGACTCGGCCAAGAGGCTGGTTTCCTCCACCAGAAGAAGTTGAACCTGCACTTAAAACAGCTGACATTCTACTGAGTTTCTCGGACCATCCTCCCCTGAAACTCCCGACTGAAGGATTTGTGCTGGACTTGGAAAATGGACCTTCAGATCAATCCTTTTACCGGTATCTGGACGCGGTCAAAGAAGCAATGAAACCAGGTTATAGTCTTTCAGACGTAAACTCGTCAAAGGTCAACGGAATTCACAAGGTTCAGCAGCCGGAACCGGAAGTGAGACATTCAGAACTGACTAGTACATCGTCGCTGGATAGTTCGGACAACCTTCCTGATTTAGTGGTCTCCCCAGCCTCCCCTCACTGCGGTACTCCAACACAAGAATTGGAATACGAAACGGTCATGTTCACCCCAATCCCGCAAAAACAAGGTATAAAATTTATATTTGACAACTTTTAG

Transcript

BRAKERNUST00000004037

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96JH8	Ras-associating and dilute domain-containing protein OS=Homo sapiens OX=9606 GN=RADIL PE=1 SV=5
A7UA95	Ras-associating and dilute domain-containing protein OS=Danio rerio OX=7955 GN=radil PE=2 SV=1
Q69Z89	Ras-associating and dilute domain-containing protein OS=Mus musculus OX=10090 GN=Radil PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005678 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01843 all species →	DIL	DIL domain	Repeat	Interproscan
PF00788 all species →	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan
PF00498 all species →	FHA	FHA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000159 all species →	Domain	Ras-associating domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR002710 all species →	Domain	Dilute domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR052072 all species →	Family	Vascular development regulator domain-containing protein	Interproscan
IPR000253 all species →	Domain	Forkhead-associated (FHA) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16027 all species →	DILUTE DOMAIN-CONTAINING PROTEIN YPR089W	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0051020 all species →	Molecular Function	GTPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000004037.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.