Gene detail

Detailed information of BRAKERNUSP00000004358.1 in Montipora cactus

Genomic Location: :...
NR annotation: XP_029195556.1, zinc finger protein 250-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERNUST00000004358

atggcTGCAAAAAACGATGACACTTTCAGCAAGTACATAAAAGAGTCTCCACGAAATGAGATCGAAGACAGCAATTCCGATGATGAGGCTCCAACAAGGGATACAGCCAGTCCAACCAAGACTGGCGTAGCTTACTTGACAGAAAACTTGATTAAGAGACTAACAAAAGAGGAGAATGTTGCACAAGTCACTACTCTACATGTCACTTTAGGAAAGGAGCTTAACAAGAAAataaagCTGATTGAGGTGACAAAACTAAGACCTTTGCAAGATCTGAGCAGTTTCTCTTTGGAAGGCAATCCCATGGCCAGCATGGAACATAGCTGGCAGTTTGTTATCTTTCAGTTAAGATCCTTGAAACTCTTGGATGGCAAAGAGATTACTGAGGATGACCGACAGATGGCTGATGAAAGGTTTGCACAAGCTGAGGAGGTTTTAGCCCAGCTGAATGACCagttaaacaaaagaaaggcacAGGTGCAGGATGCTGGCGATAAATTGGCTCAGATTCAACAGGCCATTGTTGATCAGCCAAATGGGGAGGTTGAGGGTCTACAAGCCAGACTGCAAGATGCCGAAAGAGCTTTGAGACAGGCAAAAGACAGAGCGTCACAGCTGGACAGAATGAGAGATGCTGGGGCTCGGCAGGTTCGTGATCTCGAGGGCAAAATGGCCGATCTCAGAAACCAGCTGGACAATGAAAGAGTGCGTGCTGACGAACAGATATCTTCATTGCAGTCGTTACTGGCTGACAAGGATAGGCATCTACAGGAACAGTTAACACAAGGAACACAGAATGCATCTGATATTGGCGTGAGGAAAGCCAAAGCCGTGACATTGACGACGTCCACACACCTCTCGCCAGAGTTGTTAAGTGCTTCCACATTGACCCCGCCTGTCTCATCcgttcgtcatcatcatcatcatcattatgatGACGTCAGCAGTCAGGATGGCGACGCAGCAAGAAGGAAAAAGCGAAAATCCAAGAAACGACAGCGGGACGTTTTGTTCTGCAATTTTCCGAATCACGAAGGCTTATGCAATCTAGCCGAAGGACGATTGAGACGAGCAGAAGAGGATGCTGGGGTTATTGAACAAAGAGCAGCGGAGACCTCGGTCGAGTTAATTCGGGCGGGAAATCAACTGATCAGTCTGGagatcaaagaaaaatcattaaaTGATCGACAGGACCATATAAATAAGgaagcaaaagaaaaattagAGGAAGTAAACAAAGCGCGGAATGAATCAATGGATGCCCTTAAGAATCACCGAGAGGAATTTGCGCTGCTCAGAGGAAAAATACGCGAAAGCATGACGAAAATGAAAGAATGCGAAGGGTTGAAACAACAAAAGGAGGTTGAATACGAAGAAATGCTTTCCTCaatgaatgacgaaaaaattgaACTTGAGAATGAGTTGTCTCGATTGAAAAGTGAAACACAAAGTGCTGAGGACTCTCGTACCCAGATCATGGGCGAATTAACTGGAGTCGCGACTGAGCTGGAAACTGCTATGGACGAATTGCAGAGTTCAAAAACTACCAGAGACTCGGTTGTTGGGGAAATAAATAATTTAGAAAAGGATTTGTCAGGTAAACGCCGTTGTCTTATACCCCATCCCTCTTTTGCCCTGTACTACTATTTTCTCTTTTGCTACCTGAACGAGGACAAGCGCTCATTCATAGCCTTTCCTTCCGAAGGTATTGTAGACAAGCTTCAGGAAACAGTCAAACATCTAACGGCGGACaacgaggaaaaacaaaatgcccTGATCGACGCAAGAGCCGAAGTAAAAGAACTAAAAGAGTTAATTGAATCTGCCAAACAAATGGCAATAGTAGCAGCAAAAGAAAAGCTTGATGAATCAAAGCGAGAGCTTTTGCAGAGCAAGGTAACGGCTGAGAAGGAAGCCGACTCCAGCAAAcaaatagaggaattgaaaaGGCGTTTGCGGGAAatggaagaagaaaaggaattgATTCAATGTCAAAGGAATCACTTAGCCGAATTGAAAGACGCTGTCAGCGTGGACGGCATAGGATCTGACTACTGCAATCTAAGTAAAACAAATGGCGACAAACTGAAAGAAACGCATTCTACACAAATGTGTCGATCCCTTGACTCGCAAATGGATAATTCTTTCCACACAAGGCTTGTAAAATGTGACTTTGAACTGCCTTGCCGAGATCgtgaagaaatgttaaatacaAGTGTACCGTGGTCCATTAGAGGAGCAGATGTTTCTCTTCACactgaaaataaaacagaacCGGCTGAGGTGCCTAGGCCACCATCAAGTGATAGAAGCAGTGTTAAGTGGAATCCCACAGGACAGGTATCCTTCGAGATGACTGCGGCCAACAATTCTGGCAAGAAACGAAGTTTCGATACATTCGATGGCAAGGAGAATTGGACAGCACATAGTTTTCCCGGGAAGTTAATTTCCCCGCGGATAAAACTGTCAAGTGATACCTGGGATAACATTGTTGTCTCCGAGTCAACGAATGCAGAGGAGATCCAAGAAGATAAAACCTTGACCGTCAACGATCTTATGTCTAACACAAATGAGCAGTCACGAgaggaaaataaagaacattggCAGGCTCTGCTTCAAGTTTCGCTGGTGTCAGAAAAAGTGAGAGTTGTTTCAATATCGCAAACATATATAAAAACAGAGAAGGACCCTGTGAAGGAAGATTCATCTCTGGGACGAACTCAAGCTACTGTTCTATCCTCTCCTCTTCACGATTCTCCTTTTAGCTTTGCTCTTCCCACAAACATTCAAAACCCTTCGTCACGCCTGCCCGTTCTCCTTAGACGCCACGGGTCGGATTTCTTTGGATCAAGGTTGCCGTTTGGTTTTCCCTGCAAGCCCCCATTTGCCATCAGTGGACCGTCACCTATGGTTTTACGGCCAGTTCCGAGATACGGCAGCGTGCAATTCCCTTTCAGCTGCTCAAGCCATGGCCATGGCCCTGCACCAGCTGCAACATTAAACCACAACCATGTTCTCCATCCGTCACCATTCATCACCAAAGAAGCGACGTTCTTTCCTTCAATCGTACTGCCGGGGGTCTACCGGATGCCGCATACACATATGAGCGGCAAGCTGGATGCCGAAAGCGATCCTACAAGCAGCCAAGACAGCGTTACGCCCAACGGAACGACTGCTCTAACGACTAAAGTCTACACGTGCTTGGAATGCGGCAAAGAGTTTAAGAGACCTTCAAGCCTCTCCACGCATAAACTTATCCATTCCGATCATAAGCCATACTCCTGCAGTTACTGTGGCAAGAACTTTCTTCGCAAGTCTGACATGAAGAAACACATCTTAATGCACACGGGAGTGAAACCTTTCCAGTGTAAACAATGTGGAAAAGTGTTTAGTCAGTCTTCCAACATGTTGACCCATATGAGGCGCCACACTGGAATCAAACCTTTTCCTTGTAAGATTTGCGGCAGGCGTTTTTACCGAAAGGTCGATGTTCGAAGGCATACAATGCGACATGAGTTTAAACCTGTGCAGATGGAAGCCTGA

Transcript

BRAKERNUST00000004358

Protein

Uniprot

Uniprot term	Description
A2AL36	Centriolin OS=Mus musculus OX=10090 GN=Cntrl PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23235	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan