Gene detail

Detailed information of BRAKERNUSP00000006548.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029210927.1, phagosome assembly factor 1-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O08654	Phagosome assembly factor 1 OS=Rattus norvegicus OX=10116 GN=Phaf1 PE=2 SV=1
Q922R1	Phagosome assembly factor 1 OS=Mus musculus OX=10090 GN=Phaf1 PE=1 SV=2
Q9BSU1	Phagosome assembly factor 1 OS=Homo sapiens OX=9606 GN=PHAF1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009592 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03820 all species →	SFXNs	Sideroflexins	Family	Interproscan
PF03676 all species →	PHAF1	Phagosome assembly factor 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039156 all species →	Family	PHAF1/Protein broad-minded	Interproscan
IPR004686 all species →	Family	Tricarboxylate/iron carrier	Interproscan
IPR005373 all species →	Family	Phagosome assembly factor 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13465 all species →	UPF0183 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0043001 all species →	Biological Process	Golgi to plasma membrane protein transport	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0015075 all species →	Molecular Function	monoatomic ion transmembrane transporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27411	PHAF1; phagosome assembly factor 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.