Gene detail

Detailed information of BRAKERNUSP00000010033.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: CAH3178052.1, unnamed protein product [Porites lobata]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q641B9	Actin-related protein 2/3 complex subunit 5-C OS=Xenopus laevis OX=8355 GN=arpc5-c PE=2 SV=1
Q68FI4	Actin-related protein 2/3 complex subunit 5-A OS=Xenopus laevis OX=8355 GN=arpc5-a PE=2 SV=1
Q5E963	Actin-related protein 2/3 complex subunit 5-like protein OS=Bos taurus OX=9913 GN=ARPC5L PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008727 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04699 all species →	P16-Arc	ARP2/3 complex 16 kDa subunit (p16-Arc)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006789 all species →	Family	Actin-related protein 2/3 complex subunit 5	Interproscan
IPR036743 all species →	Homologous_superfamily	Actin-related protein 2/3 complex subunit 5 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12644 all species →	ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005885 all species →	Cellular Component	Arp2/3 protein complex	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0034314 all species →	Biological Process	Arp2/3 complex-mediated actin nucleation	Interproscan
GO:0030833 all species →	Biological Process	regulation of actin filament polymerization	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05754	ARPC5; actin related protein 2/3 complex, subunit 5	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.