Detailed information of BRAKERNUSP00000010470.1 in Montipora cactus

Genomic Location: BLFO01000948.1:2618199...2618705
NR annotation: XP_015766134.1, PREDICTED: homeobox protein Nkx-6.1-like isoform X2 [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61670H2.0-like homeobox protein OS=Mus musculus OX=10090 GN=Hlx PE=2 SV=1
A0JPN1H2.0-like homeobox protein OS=Rattus norvegicus OX=10116 GN=Hlx PE=2 SV=1
A7MB54H2.0-like homeobox protein OS=Bos taurus OX=9913 GN=HLX PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001822 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →
HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR020479
all species →
DomainHomeobox domain, metazoaInterproscan
IPR001356
all species →
DomainHomeobox domainInterproscan
IPR052497
all species →
FamilyH2.0 Homeobox Transcription FactorsInterproscan
IPR000047
all species →
Conserved_siteHelix-turn-helix motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46808
all species →
H2.0-LIKE HOMEOBOX PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0043565
all species →
Molecular Functionsequence-specific DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000010470.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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