Gene detail

Detailed information of BRAKERNUSP00000010779.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015767065.1, PREDICTED: ubiquitin carboxyl-terminal hydrolase calypso-like [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3ZHS6	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus OX=10116 GN=Bap1 PE=1 SV=2
Q99PU7	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus OX=10090 GN=Bap1 PE=1 SV=1
Q92560	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens OX=9606 GN=BAP1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004546 (this species only)
Ubiquitin family	DUB\|UCH\|UCH · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01088 all species →	Peptidase_C12	Ubiquitin carboxyl-terminal hydrolase, family 1	Domain	Interproscan
PF18031 all species →	UCH_C	Ubiquitin carboxyl-terminal hydrolases	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001578 all species →	Domain	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR036959 all species →	Homologous_superfamily	Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily	Interproscan
IPR041507 all species →	Domain	Peptidase C12, C-terminal domain	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10589 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000010779.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.