Detailed information of BRAKERNUSP00000013252.1 in Montipora cactus

Genomic Location: :...
NR annotation: XP_044184284.1, uncharacterized protein LOC122964621 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G5EDK5Cadherin EGF LAG seven-pass G-type receptor fmi-1 OS=Caenorhabditis elegans OX=6239 GN=fmi-1 PE=1 SV=1
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q9Y5G3Protocadherin gamma-B1 OS=Homo sapiens OX=9606 GN=PCDHGB1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017448DomainSRCR-like domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR000998DomainMAM domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR039448DomainRight handed beta helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

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