Gene detail

Detailed information of BRAKERNUSP00000013817.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029203650.1, tRNA (guanine(26)-N(2))-dimethyltransferase-like isoform X2 [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3TX08	tRNA (guanine(26)-N(2))-dimethyltransferase OS=Mus musculus OX=10090 GN=Trmt1 PE=1 SV=3
Q9NXH9	tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens OX=9606 GN=TRMT1 PE=1 SV=1
Q9SRU7	tRNA (guanine(26)-N(2))-dimethyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=At3g02320 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005103 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02005 all species →	TRM	N2,N2-dimethylguanosine tRNA methyltransferase	Family	Interproscan
PF00642 all species →	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR002905 all species →	Family	tRNA methyltransferase, Trm1	Interproscan
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan
IPR042296 all species →	Homologous_superfamily	tRNA methyltransferase, Trm1, C-terminal	Interproscan
IPR036855 all species →	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10631 all species →	N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan
GO:0160102 all species →	Molecular Function	tRNA (guanine(10)-N2)-methyltransferase activity	Interproscan
GO:0002940 all species →	Biological Process	tRNA N2-guanine methylation	Interproscan
GO:0004809 all species →	Molecular Function	obsolete tRNA (guanine-N2-)-methyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000013817.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.