Gene detail

Detailed information of BRAKERNUSP00000014875.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: CAH3193552.1, unnamed protein product [Porites evermanni]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H583	HEAT repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=HEATR1 PE=1 SV=3
Q7SY48	HEAT repeat-containing protein 1 OS=Danio rerio OX=7955 GN=heatr1 PE=2 SV=1
Q9VM75	HEAT repeat-containing protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=Heatr1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002638 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12397 all species →	U3snoRNP10	U3 small nucleolar RNA-associated protein 10	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022125 all species →	Domain	U3 small nucleolar RNA-associated protein 10, N-terminal	Interproscan
IPR040191 all species →	Family	U3 small nucleolar RNA-associated protein 10	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13457 all species →	BAP28	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000462 all species →	Biological Process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0030515 all species →	Molecular Function	snoRNA binding	Interproscan
GO:0030686 all species →	Cellular Component	90S preribosome	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan
GO:0034455 all species →	Cellular Component	t-UTP complex	Interproscan
GO:0045943 all species →	Biological Process	positive regulation of transcription by RNA polymerase I	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000014875.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.