Detailed information of BRAKERNUSP00000014926.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029187906.2, polycomb complex protein BMI-1-B-like isoform X2 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SDR3Polycomb complex protein BMI-1 OS=Gallus gallus OX=9031 GN=BMI1 PE=2 SV=1
P25916Polycomb complex protein BMI-1 OS=Mus musculus OX=10090 GN=Bmi1 PE=1 SV=1
Q32KX7Polycomb complex protein BMI-1 OS=Bos taurus OX=9913 GN=BMI1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000402 (this species only)
Ubiquitin familyULD|UFD|RAWUL · all ubiquitin genes in this species
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16207
all species →
RAWULRAWUL domain RING finger- and WD40-associated ubiquitin-likeDomainInterproscan
PF13923
all species →
zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR032443
all species →
DomainRAWUL domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10825
all species →
RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENTInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →
Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0035102
all species →
Cellular ComponentPRC1 complexInterproscan
GO:1990841
all species →
Molecular Functionpromoter-specific chromatin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000014926.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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