Detailed information of BRAKERNUSP00000015156.1 in Montipora cactus

Genomic Location: BLFO01001380.1:483177...493170
NR annotation: XP_029214231.2, proto-oncogene vav-like isoform X2 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P54100Proto-oncogene vav OS=Rattus norvegicus OX=10116 GN=Vav1 PE=2 SV=1
Q9R0C8Guanine nucleotide exchange factor VAV3 OS=Mus musculus OX=10090 GN=Vav3 PE=1 SV=2
Q08DN7Proto-oncogene vav OS=Bos taurus OX=9913 GN=VAV1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002902 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan
PF00621
all species →		RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001715
all species →		DomainCalponin homology domainInterproscan
IPR000219
all species →		DomainDbl homology (DH) domainInterproscan
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR035899
all species →		Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001331
all species →		Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45818
all species →		PROTEIN VAVInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0043087
all species →		Biological Processregulation of GTPase activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0035556
all species →		Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000015156.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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