Genomic Location: not available for this species
NR annotation: CAB4038359.1, Retrovirus-related Pol poly from transposon TNT 1-94, partial [Paramuricea clavata]
Species Montipora cactus · all data for this species · gene families
| CDS |
| BRAKERNUST00000016082 |
| Transcript |
| BRAKERNUST00000016082 |
| Protein |
| BRAKERNUSP00000016082.1 |
| UniProt accession | Description |
|---|---|
| P04146 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 |
| P10978 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000038 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14223 all species → | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | Family | Interproscan |
| PF14244 all species → | Retrotran_gag_3 | gag-polypeptide of LTR copia-type | Family | Interproscan |
| PF00098 all species → | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036875 all species → | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR001878 all species → | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR029472 all species → | Domain | Retrotransposon Copia-like, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47481 all species → | - | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
BRAKERNUSP00000016082.1.
