Gene detail

Detailed information of BRAKERNUSP00000017822.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015771245.1, PREDICTED: uncharacterized protein LOC107349580 [Acropora digitifera]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000017822

ATGAACCGAGAGATCTCTATTCAATTGGCTAAGAATGACAATGTGGAAGTTTGTATGTACCTCCCCGCATTCAGTGAGGAAAATAAAAAAGCCGCTGATGAGTGCAGGGTCCGTCTTCTTAAGGCAAAGGAGAAACCATGGTATGATCCAATAGACTGGTTGGCCTCTGTTCCAAGTGATCATCAGATGGCGGTTGTGATTAGCCATGGCATCCACCTTGGTAGACAGGTTCCACACATAATAAATTCGCACCCTAAATGCAAATGGGTTCACGTTGTTCACATTGATCCTGAAGAATGTGGAATGATTAAGACCTATGCTGATTGTGCCAAAGGTGGGAATAAGTATGACGCTGAGGTGAAACTCTGCGAACAAGCAGATCAAGTTGTAGCTATGGGTCCCAAATTGGCTGATACCTACTCTCGTATTTGTGCAAAGGGGAAAGTCCTCAATCTCACCCCGGGCATCTTTTCAGAGTTTGCCTTTATGAAACAAGatattgaagaaaaaagaacatttcatgTTTTAGTGTTTGGACGTGGTGATAGTGAAGATTTCCAATTAAAGGGATACGACATTGCTGCCCGTGCAGTTGCTACCCTTAAAGGTGAAGCACACCCTTTCAAACTTGTGTTTGTTGGTGCGTCGAATGGAAAAGAGGAGGAATTAAAACAAAGGTTCCTTTCGCAAGGCATTTTACACCGTCAACTTAACGTGCGCAGAGCAAGGGAAAGAGAGGAGCTTGTTCAGCAGTTTTACGAGGCAGATCTTGTCATAATGCCGTCAAGAACCGAAGGTTTTGGTTTAACTGCACTCGAAGCTTTGTCTGCTGGTCTTCTTGTGCTGGTCAGCAGTAACTCAGGCCTCGGGGTGGCATTGGAAAAGGTGCCCTTTGGTAAAGACGTTGTGGTAAATTCAGAGGATCCAACAGAGTGGGCAAAGGCAATCCAGGGAGTTCGCAGCAAGCACCGAAACATACGGTTGAAGGAAGCTAGTGATCTGCTTAAAAAGTACTCAGAGACGTACAACTGGGAGAAGCAATGCCGTCGACTGTTAGAGAAGATCCATGAACTtgttgtagCTACTCTGGTTGACAGAGCAGAAGATTGTGCAGATTCTTCGAAGTCAGCAGGTGATGCACACGCCAGTGGTGGCAGTCCAGTCTTTCAAACCGCAAAGAATTATCCAACACAGACGAAACTTGTAGATGAGAACTCACACAGCAATTTTCGTATAGAGTGTTATGAAAAGAGTTTGCACATTGCCAGGGAAGCAGGCGACCGGGCTGCAGAAGGAAAAGCCTATTATCATCTTGGAACCATGTACTTCAGCGCCAAGGATGTTCCAGAAGCTTTAAAGTGTTTTGAAAAGAGTCTGCACCTTGCCACGGAAGCAGGCAACCGGGCTGGAGAAACCACTGCCCATTTTTGTCTTGGCATCGTTTACTTTAACCAGAgcgattttgaaaaagctgtcAGGTGTTTTGAAGAGAGTTCAAAGGTTGCTAGGGAAGTAGGCGACCACGCTGGAGTAAGGCGTGCCAGTCATTATATCGCAGAATCTTACTTGGGTCTTGGCAATTCTGTAAAAGGTACTGAGTATCGTGAAAAGTATTCAAAATGTTTCAGGGAAGTGGGTGCTCATAGTGAGGAGAGAGCAGAGGGACCAGGCTACAACATTCAGGATTTTCGAAAAGCTATCGAGTTTTATGAAAAGAGTTTGAACATTGCCAAGAAAGCTGGCGACCAGGCTGCAGAAGCAAATGCCTATTTTAATCTTGGGGCCGCTTACTACTCTCTCCGCAATATTCCAAAAGCTATCGATTGTTCTGAAAAGTGTTTGCACATTGCCAAGGAAACAGGCAACCGCGCTACAGAAGGAAAGGCCTATTGGAATCTTGGGCTTGTTTACGACTCCCAGAGCAATTTTTCGAAAGCTATCGAGTCTTATGAAAAGGTTGTGAACATTGCCAGGGAAGCAGGCGACTGGGCTACAGAGGCAAATGCCTATTACAATCTTGGGAACGTTTATCAGTCCCAGAGCGATCTTCCAAAAGCTGTCGAGTATTATAAAAAGAGCTTGCACTTTGCCAGGGAATCAGGCGACCAGGATACAGAGAGAAAATCCTATTTAGCTCTTATGAGCGCTTCCAAGTCGCACGAGGATTTTCCAAAAGCTATCGAGCGTTTTAAAAGGAGTTTGAACACTGCCAGGGAAGCAGGCGACCGGGCTGCAGAAGTAAAAGCCTATTATGAGCTTGGAACCATGTACTTCAGCGCCGAGGATATTCCAGAAGCTATAAAGTGTTTTGAAAAGAGTCTGCACCTTGCCACGGAAGCAGGCAACCGGGCTGGAGAAATCACTGCCCATTTTTGTCTTGGCATCGTTTACTTTAACCAGAgcgattttgaaaaagctgtcAGGTGTTTTGAAGAGAGTTCAAAGGTTGCCAAGGAAGTAGGTAACCACGCTGGAGTAAGGCGTGCCAGTCAATATATCGCAGAATCTTACTTGGGTCTTGGCAATCCTGTAAAAGGTACTGAGTATCGTGAAAAGTATTCAAAATTTTTCAGGGAAGTGGGTGCTCATAGTGAGGAGAGAGCAGAGGGACCAGGCTACAACATTCAGGAACAGGTGAATAGTGCTAGTGGATCAGATGAGAGAGGTGCCATTTTGCAATTGGCAAGTACAGGTCATGGCACTGGTACGAGGCCAGTCCAAAGCGACAGGGAATGTTCAGTTCCTGGCATTGAATTAAATACCACTGCAGCAGGTATAGGCAGCATTGACCATGTGAATAGTGCTATTGGATCAGAAGGAAGAGTTGCCATCTTGTCATTGCCAAGTACAAGTGATAGCACAGaggaagaagaaattgttgAATGGCTGAAACGTAAAGATACAGTTAATGGGAatgaaggagaagaagaagttgAAATACAAGAGAGGAAAAAGAGGAACCTGGAATGGTCCCTCGAGTTGAAGGTGAGTTTGATGGAATTAGAAAAAGAAGCAAGAGTACTGGGTAAAGGACACATGAAGAGACTGAAAGAGAAGTGGGGTGAAAAGCATCCAAAGTACAGGAATATTACGCCACAATGCCTTCTAGACAACGCAGGGAGATTCAAAAAAGATCCAGTGCTGCAAAATCTAATTTTAGTTAGAAGACAAGAAATGCAAGAAGAGCAAGGAGGACAAGTGCAACAACAGCAAGCAAGGAATTCAGTGGTAACGGAAGGAATAGAAATAGTTGAGAAACAGGATTTAAGTGGAACAGCTGATCAGCAAATTGAACAGGAGGTATTAAAACGGTGA

Transcript

BRAKERNUST00000017822

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1R8N8	D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1
D5UJ42	D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1
D1BD84	D-inositol 3-phosphate glycosyltransferase OS=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) OX=446469 GN=mshA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000025 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706 all species →	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF12862 all species →	ANAPC5	Anaphase-promoting complex subunit 5	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006597 all species →	Repeat	Sel1-like repeat	Interproscan
IPR052386 all species →	Family	G-protein-signaling modulator	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR026000 all species →	Domain	Anaphase-promoting complex subunit 5 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954 all species →	LD33695P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000132 all species →	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965 all species →	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092 all species →	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938 all species →	Cellular Component	cell cortex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000017822.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.