Detailed information of BRAKERNUSP00000019212.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: KAI2586237.1, SEH1 like nucleoporin, partial [Homo sapiens]
Species Montipora cactus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C1BK83Nucleoporin SEH1 OS=Osmerus mordax OX=8014 GN=seh1l PE=2 SV=1
Q6TGU2Nucleoporin SEH1 OS=Danio rerio OX=7955 GN=seh1l PE=2 SV=2
Q4FZW5Nucleoporin SEH1-A OS=Xenopus laevis OX=8355 GN=seh1l-a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005504 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037363
all species →		FamilySec13/Seh1 familyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11024
all species →		NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0031080
all species →		Cellular Componentnuclear pore outer ringInterproscan
GO:0034198
all species →		Biological Processcellular response to amino acid starvationInterproscan
GO:0035859
all species →		Cellular ComponentSeh1-associated complexInterproscan
GO:1904263
all species →		Biological Processpositive regulation of TORC1 signalingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000019212.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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