Gene detail

Detailed information of BRAKERNUSP00000019967.1 in Montipora cactus

Genomic Location: BLFO01001751.1:321929...332919
NR annotation: XP_029204096.2, proteasomal ubiquitin receptor ADRM1-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GN67	Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis OX=8355 GN=adrm1-a PE=2 SV=2
Q6NZ09	Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1
Q7ZXD6	Proteasomal ubiquitin receptor ADRM1-B OS=Xenopus laevis OX=8355 GN=adrm1-b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007210 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16550 all species →	RPN13_C	UCH-binding domain	Domain	Interproscan
PF04683 all species →	Rpn13_ADRM1_Pru	Proteasome complex subunit Rpn13, Pru domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006773 all species →	Family	Proteasomal ubiquitin receptor Rpn13/ADRM1	Interproscan
IPR032368 all species →	Domain	RPN13, DEUBAD domain	Interproscan
IPR044867 all species →	Domain	DEUBAD domain	Interproscan
IPR038108 all species →	Homologous_superfamily	RPN13, DEUBAD domain superfamily	Interproscan
IPR044868 all species →	Domain	Rpn13/ADRM1, Pru domain	Interproscan
IPR038633 all species →	Homologous_superfamily	Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12225 all species →	ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008541 all species →	Cellular Component	proteasome regulatory particle, lid subcomplex	Interproscan
GO:0061133 all species →	Molecular Function	endopeptidase activator activity	Interproscan
GO:0070628 all species →	Molecular Function	proteasome binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06691	RPN13; 26S proteasome regulatory subunit N13	-	Proteasome	ko03051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.