Detailed information of BRAKERNUSP00000020435.1 in Montipora cactus

Genomic Location: BLFO01001775.1:22470...31758
NR annotation: XP_015775161.1, PREDICTED: leucine-rich repeats and immunoglobulin-like domains protein 1 [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q60625Intercellular adhesion molecule 5 OS=Mus musculus OX=10090 GN=Icam5 PE=1 SV=2
Q90773Protein CEPU-1 OS=Gallus gallus OX=9031 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000570 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →
Ig_3Immunoglobulin domainDomainInterproscan
PF13895
all species →
Ig_2Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan
IPR051116
all species →
FamilyCell Surface Receptors and Adhesion MoleculesInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11973
all species →
CELL SURFACE GLYCOPROTEIN MUC18-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000020435.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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