Gene detail

Detailed information of BRAKERNUSP00000020552.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029195974.1, heat shock factor protein isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P38529	Heat shock factor protein 1 OS=Gallus gallus OX=9031 GN=HSF1 PE=1 SV=1
Q08DJ8	Heat shock factor protein 1 OS=Bos taurus OX=9913 GN=HSF1 PE=2 SV=1
Q00613	Heat shock factor protein 1 OS=Homo sapiens OX=9606 GN=HSF1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003444 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00447 all species →	HSF_DNA-bind	HSF-type DNA-binding	Domain	Interproscan
PF06546 all species →	Vert_HS_TF	Vertebrate heat shock transcription factor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000232 all species →	Domain	Heat shock factor (HSF)-type, DNA-binding	Interproscan
IPR027725 all species →	Family	Heat shock transcription factor family	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR010542 all species →	Domain	Vertebrate heat shock transcription factor, C-terminal domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10015 all species →	HEAT SHOCK TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000020552.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.