Gene detail

Detailed information of BRAKERNUSP00000020640.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: CAH3176898.1, unnamed protein product [Porites lobata]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000020640

ATGGATCTCGACTTTTTCGTTCTGTTTTCTTCGATCGCCTCGCTACTTGGAAATCCAGGTCAAGCCTCATATGCAGCAGCCAATGCTTTTTTGGACGGACTGTCACAGTATCGTCGCTCTGTGCTTGGCCTACCTGCGGTGTCCATCAACTGGGGACCTATCAAAGGAGCTGGAGTTCTCCAACGAGAAGGAGCCATTGCCGAGCACCTTTCGAGGGCTGGTTATTTTTTGCTTCCGTCGTCACAAGCAATCGAATACATGGAAAAAATTCTCATTGAGGAACCAGGAAGAGCACAGCTGGGTTTGTTTGACGTCGACTGGCAGAAAATTCAATCGAGTACGCCAGGGTTGGCAACATCCACCCGTTTGACTGAGATCAGAAACAAACAAGATGTTGCTGACAGCGTGCAATTCAAGCAGCTACTTGTTCAAAGGATACTTGTGGAGAAAAACCCAAATAAGCGAGAGGAAATGGTTCATGAATACGTCACTGATCTGCTGTGCTCGTGGACAGGCAACTCTCCCTCCGACCTTGACTTCAATTCCAGTTTGTACAACTATGGAATGGACTCATTTTCAGGACTAACATTTAAAATGCAAATAGAGTCTTCTCTTCATATTTCCTTTGAGGTATTTTACTTCACCCAACCTGATACAACTCCTGCCAGACTGGTAAAAGACATCAACCAAAGGCTTAATGATACCAAGGCACCTGGCCGAAAAGAGGAAGATCTCCACAGTGATGACATAGCTCTCAAATTGGAGCCAGCATTACCTGGTAACGTTGCGCAGCGGACTCATACTGCTAAAGATTTAGTCCATCCAATAGACGATGCGTCGCCTACTGCCACTTATCACCTCATTCCTCTTTGCAAACCGGAACAAGCTGAGGTCAAGTTATTTTGCGTGCATCCAGCTGGACGATATGTCATGAACTTGACACCAATCTCTAATGGCTTCAGACAACAATCGCTCGTGGCATTCTATGGCATTGGATACACGGAGCCAACAATGAGGGCGGAAGACCGAAGTGTGCGGAAGATGGCGCAAAGCTATGTTAGGATGATCAAGGAAGTCCAGAGACACGGTCCGTACTATTTGGCCGGACAGTCATTTGGTGGCCTTGTGGCGTATGAGATAGCAAACGTTTTCACTGAACAGAACGAAGACGTCGCGTTCGTGGCAATGATTGACACATTTCCGTGGTACATGCAAAACAGAACTGGCGCTGCCAGGTTGGAGTTGCTTTTCAGTGGCAGAAGATTGGAAAATCTATTGGATGGCCTATTCGAGGCGACATTTGAGCAAGTGCTTTCCAAGCTCGCTACCACCAACCTTACCATGACGGCTCAGGAATACAAAAATCTAAGAGAAACAGAGACGCTGGAATCTACAATTGCGTTTCTCCAAAACAGAGCTGCGGAACACAAAATCCCCATCTATGACATTACTTCACTTCGAGATTCTCTTCGGCATGACAACATGATGGCAACTCGAAAACACAGAGAATGGAAGCCACCACAGGTTCGTTTCAAAGGTCCTTTGACCTACTTCAAGAGCGCCGATCAAAAGTATACACCAACTCGACCACTGCAAGAGAGCTCAGATGCTGCTTGGTCGCTCGTAATGGAAGGTAATATAGATGTTTACATCTGCCCAGGAGATCACCTTGCTCTCAGCGAACCAGAGGACGGTGCAGTCATTGGTCAAATTCTCGCTGCAGCTGTCGGTTTGAAGTACAGAACCTTGCGTCCGACTCTACCAAGAGTGTCCCCAACATTCAAAGAACGCCGGTCTATTCATGAATTTGAGGCTGGAGTTGATGTCCTGCTTTATTCCAAAAAAGcGTTCAAGACACCTCGTGTGGGGACTTTGTTTCTTGACAGCCAAAACCAAACACTTTCATTCAAGAGCACCAATCGGAGATCAGATGATCGAAATCGAACGTCTAAACCAAAGAAAATACCCCTTAAAGAATTGCGAAATATTGTCCCAGGGAACCATGAACCAAGTTTTCTGAAAATTGCCACGAAGATGCATGAAAGCAGTGAAGGGAGAAATGCCACCGATTTCATGCTCACCACCTCTATCAAGACTGGAAAAAAGACATACAACTTGAAATGGCACGATTTCAGAGATATGAGAGAATTCTACAGTATGATTGAAGCCGTTATGTGTGTGACCGTCTTTAAAAAGTGA

Transcript

BRAKERNUST00000020640

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E0D203	Polyketide synthase GfsB OS=Streptomyces halstedii OX=1944 GN=gfsB PE=1 SV=1
Q9ZGI5	Pikromycin polyketide synthase component PikAI OS=Streptomyces venezuelae OX=54571 GN=pikAI PE=1 SV=1
A0A0U4ZX08	Low-reducing polyketide synthase drtA OS=Aspergillus calidoustus OX=454130 GN=drtA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000656 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00975 all species →	Thioesterase	Thioesterase domain	Domain	Interproscan
PF00550 all species →	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF08659 all species →	KR	KR domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050091 all species →	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR001031 all species →	Domain	Thioesterase	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR009081 all species →	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR013968 all species →	Domain	Polyketide synthase, ketoreductase domain	Interproscan
IPR036736 all species →	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775 all species →	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004312 all species →	Molecular Function	fatty acid synthase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006633 all species →	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0071770 all species →	Biological Process	DIM/DIP cell wall layer assembly	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000020640.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.