Detailed information of BRAKERNUSP00000020778.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015762420.1, PREDICTED: elongator complex protein 2-like [Acropora digitifera]
Species abbreviation MCACT · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q496Z0Elongator complex protein 2 OS=Rattus norvegicus OX=10116 GN=Elp2 PE=2 SV=1
Q05AM5Elongator complex protein 2 OS=Danio rerio OX=7955 GN=elp2 PE=2 SV=1
Q91WG4Elongator complex protein 2 OS=Mus musculus OX=10090 GN=Elp2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003111 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR037289
all species →		FamilyElongator complex protein 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44111
all species →		ELONGATOR COMPLEX PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0002098
all species →		Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588
all species →		Cellular Componentelongator holoenzyme complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000020778.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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