Gene detail

Detailed information of BRAKERNUSP00000020882.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029211335.2, transmembrane protein 117-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000020882

ATGGTTTACAGGTATGAAGGAACTGGCCGATCACTCTCCTTAAAGCTTATACAACAACTGAGAGAACAGAGTGCCAAACTAGGCTCCATATCATCGTCATCTCAATCAAGCAACAAAGGAAGTAGCTCTGCCCCTCTTGGCCGCACCCTGCATGAGATAACACTAAGTGAGTCAATTCGTTATGCTCCTGGAGATGAGATCGAGAAGTGGCTGAATCACCTGCTCTGTTTGGATGCTACTGTGGTGCAGAAAATTACCGCAGGGTGCCCACTACCTGAAAGCTGTGATTTACAGTTTAGATATTATGTGAACCGTGATACTCTCTTCTCGTACCACAGAGCTTCTGAAGTTTTTCTACAAAGACTTATGGCTCTTTATGTGGCTTCTCATTACAAGaacaCACCAAATGACCTTCAGTTGTTATCCGATGCTCCAGCTCATCATATCTTTTGTCTGCTTGGACCAGTTGATCCAGCACAGAACACCCTACCCGAAGTATACTGTGTCCTACAGGTGTGTCTGGAAGGTGACATTTCCAAGGCCTCCATCATGAACAGTTTATCTCGAGGAAAAAGGGCATCTGGTGATTTGATACCGTGGACAATATCACAGCAGTTTAATGATCATGACTTTGCGGGACTGTCAGGTGGAAGGATTGTGCGCATTGCAACACATCCTGATTTTCAGGGGATGGGTTATGGCCGACGAGCTATGAACTTGCTAATTCAGTACTACGAAGGAAAAATTCCAAGTTTGGCAGAGGAGGGCATGGAAGAGAACCAAATTGCAACCTTGACTGAAAATGACGAAGTTGGTTTATTGAAAGAAGTTATTTCTCCCAAAAGCAATCTTCCGCCTCTTCTGCTTAAACTGAGTGAAAGACAAGCTGAAAGGTTGGATTATCTCGGCGTCTCTTACGGACTTACAGCTCAGCTACTCAGGTTTTGGAAGAAATCTAACTTTGCTCCAGTCTACTTGCGACAAACCCCGAATGAATTGACTGGTGAGCATTCTTGCATTATGCTGAGACTTTTGAAAGAATCGGAAGATGCAACTGACGAAAGCTGGTTATCAGCATACATTGCGGGTATATCGAAGACAGACTTGGAATCAGTTCTGACAAAGTACGATCTTAAGAGGCTGGATCTTTATTCGCGTAATATGGTGGACTATCATCTTGTTACCGATTTACTTCCTGCAGTTTCAAGGCTGTATTTCCTTCAAAAGTTTGACTTTGAACTGTCTGCTGTTCAGTCGGCAATTCTCCTTGGTCTGGGACTCCAACACAAGACTATCGAAACCCTCGAGAAAGAATTAGAACTTCCTTCTTCACAGTTACTCGGCTTGTTTAACAAGACAATAAGGAAAGTTGTACAGtcACCTCACAAAGACAATTTAAAGCACAAAGTTCGCATTCAGAGGAGGAATGGAAGATATTATTTCCAACATCCTTACTCCAGACTGTTTGTggcttattttgttgttttctgtaACTTTCTAATATATGCAGAGGATCCAGTATCACACAGCAGGGCAAACTGTACCATTCCTGTTGTTGGAAACGACTTTGCATTTGTTACGTACAGATATCCCCCAGGCGGCTGGTCTGTTCTTAAAGTATTCTTGTGGCTAGTAGCAATTATTGTTGGAGTGCTGGtcggaaagtttttttttcataaacttGTGTTCAATCGATGGATGACGTTGTCAATGTTCTACCAGGACAGAGGCTCATGGATGGTGATGTTTCTGACAACTTTAGTGTCGCTGTTTATTTTCTCCTTCCTTTACAATGGATTTTTGAGTGCAGGTGGGGATGAGGTGTCAGTGTATAAAGTCACAACGTATCTTGGCATTCAGAATGACAGCTTCATGAAAGCAGCAGCCCTGGGAACTTGGACGGGAGATTTTGTAACAGCTTGGATGGTTACAGATATGATGCTTCAGGATAAACTCTACCCGAATTGGAACGTGAAACTCCGAAAGATATGGAAGACTGGCTGGACTCGCATCTACTTGTTCTGGATAGTGTGGATTGTTGCCACAGTAATTGTTGCCACAGGGATTGTATCTGACTTTGTGAAATGGGACACATTGAACAGAGACTTTGTCTCTACAAATGAATTGTCTCGTGCCTTTCTGGCATCATTCATTCTTATTATGGACTTGTTGATCGTGATGCAGGACTGGGAATTCCCTCAATTCCAAGGAAATATGGATATTAAACTTCCGGGTGTAGACACTGCATCATTTTACTTCAAGTTGCCTCGCTTttgtaagaaagaaaactgGCATGTTCACATCACTGGAAAGTGGTTTAACTATGGAATTATCATGCTGGTCATGATTCTGGACCTGAACATGtggaaaaatcaaattttttatGATCCTTTTACGTTTGGTCAGTACACGGATGAGGGTGGCTACATCTATTCTGTTCTTGATCAGAACTTTATTAACTCTGCGAATAAAACCCTTCTGTCGCACAAGTGGAGATCGCAAAATATAAACCCCATGACAAACAAAAGCTACGTTGAAACAGATCCTCATATGAATTCCAAATACCTGGAATACCCTTTGGCTTTGAAAGGAATCGCCttcattccttcgatcattgcTTTCATAACTTTTGGAGGTCTCATCTGGCGCTATGGAAGAGAGGAATTTATTGTGGAAAAAGTTGTTGATGATGTTGATAAAATTGACAGCGTGGATGGTTGGATCATTGAAGATGTAATATTACATGAAGGTGAAAATGATGAATCGTTCTGTGGTAGAGATGGTGCAGAAGCATCTGTTGATGTCAGGTGTGATGTTCACCCTAAACATGAGCAGTGCACTGGTGAAGTACCATCAGATGCTAAAGAGGGAACACCGGTCCTCATCAGTGTCCAAAATGTAACCTGTGTGTAA

Transcript

BRAKERNUST00000020882

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K224	RNA cytidine acetyltransferase OS=Mus musculus OX=10090 GN=Nat10 PE=1 SV=1
Q9H0A0	RNA cytidine acetyltransferase OS=Homo sapiens OX=9606 GN=NAT10 PE=1 SV=2
Q8BH18	Transmembrane protein 117 OS=Mus musculus OX=10090 GN=Tmem117 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002438 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13718 all species →	GNAT_acetyltr_2	GNAT acetyltransferase 2	Family	Interproscan
PF13725 all species →	tRNA_bind_2	Possible tRNA binding domain	Family	Interproscan
PF05127 all species →	Helicase_RecD	Helicase	Domain	Interproscan
PF15113 all species →	TMEM117	TMEM117 protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029370 all species →	Family	TMEM117 protein	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000182 all species →	Domain	GNAT domain	Interproscan
IPR027992 all species →	Domain	Possible tRNA binding domain	Interproscan
IPR007807 all species →	Domain	Helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31226 all species →	TRANSMEMBRANE PROTEIN 117	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0070059 all species →	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000020882.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.