Gene detail

Detailed information of BRAKERNUSP00000020882.1 in Montipora cactus

Genomic Location: :...
NR annotation: XP_029211335.2, transmembrane protein 117-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERNUST00000020882

ATGGTTTACAGGTATGAAGGAACTGGCCGATCACTCTCCTTAAAGCTTATACAACAACTGAGAGAACAGAGTGCCAAACTAGGCTCCATATCATCGTCATCTCAATCAAGCAACAAAGGAAGTAGCTCTGCCCCTCTTGGCCGCACCCTGCATGAGATAACACTAAGTGAGTCAATTCGTTATGCTCCTGGAGATGAGATCGAGAAGTGGCTGAATCACCTGCTCTGTTTGGATGCTACTGTGGTGCAGAAAATTACCGCAGGGTGCCCACTACCTGAAAGCTGTGATTTACAGTTTAGATATTATGTGAACCGTGATACTCTCTTCTCGTACCACAGAGCTTCTGAAGTTTTTCTACAAAGACTTATGGCTCTTTATGTGGCTTCTCATTACAAGaacaCACCAAATGACCTTCAGTTGTTATCCGATGCTCCAGCTCATCATATCTTTTGTCTGCTTGGACCAGTTGATCCAGCACAGAACACCCTACCCGAAGTATACTGTGTCCTACAGGTGTGTCTGGAAGGTGACATTTCCAAGGCCTCCATCATGAACAGTTTATCTCGAGGAAAAAGGGCATCTGGTGATTTGATACCGTGGACAATATCACAGCAGTTTAATGATCATGACTTTGCGGGACTGTCAGGTGGAAGGATTGTGCGCATTGCAACACATCCTGATTTTCAGGGGATGGGTTATGGCCGACGAGCTATGAACTTGCTAATTCAGTACTACGAAGGAAAAATTCCAAGTTTGGCAGAGGAGGGCATGGAAGAGAACCAAATTGCAACCTTGACTGAAAATGACGAAGTTGGTTTATTGAAAGAAGTTATTTCTCCCAAAAGCAATCTTCCGCCTCTTCTGCTTAAACTGAGTGAAAGACAAGCTGAAAGGTTGGATTATCTCGGCGTCTCTTACGGACTTACAGCTCAGCTACTCAGGTTTTGGAAGAAATCTAACTTTGCTCCAGTCTACTTGCGACAAACCCCGAATGAATTGACTGGTGAGCATTCTTGCATTATGCTGAGACTTTTGAAAGAATCGGAAGATGCAACTGACGAAAGCTGGTTATCAGCATACATTGCGGGTATATCGAAGACAGACTTGGAATCAGTTCTGACAAAGTACGATCTTAAGAGGCTGGATCTTTATTCGCGTAATATGGTGGACTATCATCTTGTTACCGATTTACTTCCTGCAGTTTCAAGGCTGTATTTCCTTCAAAAGTTTGACTTTGAACTGTCTGCTGTTCAGTCGGCAATTCTCCTTGGTCTGGGACTCCAACACAAGACTATCGAAACCCTCGAGAAAGAATTAGAACTTCCTTCTTCACAGTTACTCGGCTTGTTTAACAAGACAATAAGGAAAGTTGTACAGtcACCTCACAAAGACAATTTAAAGCACAAAGTTCGCATTCAGAGGAGGAATGGAAGATATTATTTCCAACATCCTTACTCCAGACTGTTTGTggcttattttgttgttttctgtaACTTTCTAATATATGCAGAGGATCCAGTATCACACAGCAGGGCAAACTGTACCATTCCTGTTGTTGGAAACGACTTTGCATTTGTTACGTACAGATATCCCCCAGGCGGCTGGTCTGTTCTTAAAGTATTCTTGTGGCTAGTAGCAATTATTGTTGGAGTGCTGGtcggaaagtttttttttcataaacttGTGTTCAATCGATGGATGACGTTGTCAATGTTCTACCAGGACAGAGGCTCATGGATGGTGATGTTTCTGACAACTTTAGTGTCGCTGTTTATTTTCTCCTTCCTTTACAATGGATTTTTGAGTGCAGGTGGGGATGAGGTGTCAGTGTATAAAGTCACAACGTATCTTGGCATTCAGAATGACAGCTTCATGAAAGCAGCAGCCCTGGGAACTTGGACGGGAGATTTTGTAACAGCTTGGATGGTTACAGATATGATGCTTCAGGATAAACTCTACCCGAATTGGAACGTGAAACTCCGAAAGATATGGAAGACTGGCTGGACTCGCATCTACTTGTTCTGGATAGTGTGGATTGTTGCCACAGTAATTGTTGCCACAGGGATTGTATCTGACTTTGTGAAATGGGACACATTGAACAGAGACTTTGTCTCTACAAATGAATTGTCTCGTGCCTTTCTGGCATCATTCATTCTTATTATGGACTTGTTGATCGTGATGCAGGACTGGGAATTCCCTCAATTCCAAGGAAATATGGATATTAAACTTCCGGGTGTAGACACTGCATCATTTTACTTCAAGTTGCCTCGCTTttgtaagaaagaaaactgGCATGTTCACATCACTGGAAAGTGGTTTAACTATGGAATTATCATGCTGGTCATGATTCTGGACCTGAACATGtggaaaaatcaaattttttatGATCCTTTTACGTTTGGTCAGTACACGGATGAGGGTGGCTACATCTATTCTGTTCTTGATCAGAACTTTATTAACTCTGCGAATAAAACCCTTCTGTCGCACAAGTGGAGATCGCAAAATATAAACCCCATGACAAACAAAAGCTACGTTGAAACAGATCCTCATATGAATTCCAAATACCTGGAATACCCTTTGGCTTTGAAAGGAATCGCCttcattccttcgatcattgcTTTCATAACTTTTGGAGGTCTCATCTGGCGCTATGGAAGAGAGGAATTTATTGTGGAAAAAGTTGTTGATGATGTTGATAAAATTGACAGCGTGGATGGTTGGATCATTGAAGATGTAATATTACATGAAGGTGAAAATGATGAATCGTTCTGTGGTAGAGATGGTGCAGAAGCATCTGTTGATGTCAGGTGTGATGTTCACCCTAAACATGAGCAGTGCACTGGTGAAGTACCATCAGATGCTAAAGAGGGAACACCGGTCCTCATCAGTGTCCAAAATGTAACCTGTGTGTAA

Transcript

BRAKERNUST00000020882

Protein

Uniprot

Uniprot term	Description
Q8K224	RNA cytidine acetyltransferase OS=Mus musculus OX=10090 GN=Nat10 PE=1 SV=1
Q9H0A0	RNA cytidine acetyltransferase OS=Homo sapiens OX=9606 GN=NAT10 PE=1 SV=2
Q8BH18	Transmembrane protein 117 OS=Mus musculus OX=10090 GN=Tmem117 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13718	GNAT_acetyltr_2	GNAT acetyltransferase 2	Family	Interproscan
PF13725	tRNA_bind_2	Possible tRNA binding domain	Family	Interproscan
PF05127	Helicase_RecD	Helicase	Domain	Interproscan
PF15113	TMEM117	TMEM117 protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029370	Family	TMEM117 protein	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000182	Domain	GNAT domain	Interproscan
IPR027992	Domain	Possible tRNA binding domain	Interproscan
IPR007807	Domain	Helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31226	TRANSMEMBRANE PROTEIN 117	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0070059	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan