Gene detail

Detailed information of BRAKERNUSP00000021494.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029191913.2, hepatocyte nuclear factor 1-beta-A-like isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1L1N5	Hepatocyte nuclear factor 1-beta-A OS=Danio rerio OX=7955 GN=hnf1ba PE=2 SV=2
P35680	Hepatocyte nuclear factor 1-beta OS=Homo sapiens OX=9606 GN=HNF1B PE=1 SV=1
Q5RER5	Hepatocyte nuclear factor 1-beta OS=Pongo abelii OX=9601 GN=HNF1B PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009091 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04814 all species →	HNF-1_N	Hepatocyte nuclear factor 1 (HNF-1), N terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010982 all species →	Homologous_superfamily	Lambda repressor-like, DNA-binding domain superfamily	Interproscan
IPR039066 all species →	Family	Hepatocyte nuclear factor 1	Interproscan
IPR044869 all species →	Domain	HNF-1, POU-specific (POUs) atypical domain	Interproscan
IPR044866 all species →	Domain	HNF-1, dimerization domain	Interproscan
IPR023219 all species →	Homologous_superfamily	Hepatocyte nuclear factor 1, N-terminal domain superfamily	Interproscan
IPR006899 all species →	Domain	Hepatocyte nuclear factor 1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11568 all species →	HEPATOCYTE NUCLEAR FACTOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001889 all species →	Biological Process	liver development	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030073 all species →	Biological Process	insulin secretion	Interproscan
GO:0031016 all species →	Biological Process	pancreas development	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000021494.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.