Detailed information of BRAKERNUSP00000022347.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015747308.1, PREDICTED: YTH domain-containing protein 1-like [Acropora digitifera]
Species abbreviation MCACT · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R7463'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2
B2RR833'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1
Q9H6S03'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003208 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04146
all species →		YTHYT521-B-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045168
all species →		FamilyYTH domain containing proteinInterproscan
IPR007275
all species →		DomainYTH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12357
all species →		YTH YT521-B HOMOLOGY DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000381
all species →		Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0048024
all species →		Biological Processregulation of mRNA splicing, via spliceosomeInterproscan
GO:1990247
all species →		Molecular FunctionN6-methyladenosine-containing RNA reader activityInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000022347.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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