Gene detail

Detailed information of BRAKERNUSP00000022774.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015753034.1, PREDICTED: uncharacterized protein LOC107332805 isoform X1 [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000022774

ATGGGCAATATCCACAATCATTTGAATTCTCTTGAGGCTGCACCTGATCACAAgtattcctttgtttcaaaCAGAAATGAAGAACCCAGTGATTCACACAACGACTCAGGCATTGATGAATTTTCATCCCCTTTGTCTCCCGGGGACAACGTCACCATTACTGTGCACGTGGATGATGTCTATGACTGCAATTCTAGTGCCCTACCTGGCAACCAGACTGGTGCATATGCTTCAAGTACCTCAAGTTTAGCAGAAATGACAGAATCCACCACCCCAGAGAACACCTCAGATGATTTGGAAATTGACCCTGATGACATACAAATAACAATTGCTATACTAAAAGCATTGAATTTAGTGGATCAAATGAATGGGTCAATATCAGATTTTGAAGACGTCCTGCAATTTGCCAAAGAGTTGTACTGTAGAAAGGACAGTCACTTAGAAGAAAAATGGCCAGGGAATTGGCAAGACACACAAACAGTTCTCCAAAATTGTGGATACAAATCTCCCAGAGAACTTTACATCTGTTTGGATGAGAGCCATTACACACAATGGGATGTCATGGAAAATGGTGAAGACAAATGCAGACACTGCGGAAAGAAAGGCACGATAAAATTCTACTACCTAGGAATTTCTGACAAAGTTCAACTTTGGTGTAGTAATCGTGGTGTGTGTGAGAAAATGATGGCCCACTGGGGTGAGAAAGAACACTGGTTAGTAGGGGAAGGTCCTAACTTTATATTGAAAGAAATCTGGGATGGTGAAAGATTTAATGAGCTTAAGTGGTTCTGGGATCCAGATTCTCGCTGGATGCTACCTGTTAAGTGTCAGTACTGTGCTAATGTGACAAGTAGTGATGAGATCGAGGAATTTCCAGAAGAAGAAGGGAAGCATGTGATTACATGTCATGAATGTGGATCAAGGTGGAAGCACACACCATGCTATTCTAGAGGGGATCCCCGCAATATTGCACTTATTGGCCACTGGGATGGTTGGCAGCCCTTTGGATACCCTGGAGCACATAGTTGTGGGGCAATAGAAGTGACAATAGCTAACATGGCTAAGGCTGAAAGAAGCAAAACTGATCAAGTTTATGTGGTGGGATTTGTCCCTTCTTATCAGCTACCTAAGAGTCGTCCATGTTCCTTGGATCCATTCCTGCATCCCCTTGTCAGTGACATTGAAAACATCTTCATTAATGGTCTTGAAGTTGACTATGCTGCATCATTTCCTTGCCTTCCTGCAGGCAGGATCACCATTAGAGTATTGATTTTATTATGGACAGGTGATTACCCTGCACAACATGAGGTTGGAAAGTTCATCAAACATGGGATATTGCCATGTCGTAGAGATAAACTGAAAGGAACCATAAATCCCGAGGGTGGGAGCACATACTACTATGGTGATAATAGGTACCATGCCAAATATCCGTGGGAGGAAAGAAAGTTGGAAGAGGCTTTGCCACTGATGACAGATATTAATCAGGAAGACCGCAAAACTGTCAGAGCAAGCAAAAGTCGAACCAGTGGATACACTGGATTAAGCATTCTTCATCGATTACACAAACTTTACGGATTCAGCATCTTCAAAGATCTTGTTTATGATACAATGCACAACCTCCCAACTAATGTCATTGCATCACAACTCAAGGAACTCATTGCATCTGAGAAGATTGACAGTAAACTTGTTGCCCAACGACTGAAGGCCTTCCCTTGGACAGCAGAACTTAAAGATGGAAGACTTCCCACTGGTATTGATTCACGTTTGGCCTTCTGGAAGGCAGAAGAACTTCATAAATTCGCCTTTCCAGCATCTGAAGTAATGTTTGCTGACCTACTGGAGGACATGGACTATCACATTTGGCAATTGACAGTAAGGATGAATGAACTGGTCTTCTCTAAAAGAGATGGTTGGAGCCTTGAGGATGCCCACCTTTTCTTCAAATTAGCTAGCCGATATTTGATCCTCACTGAGGAGCACAGAGGATTCACTTCCTGTGTAGTCACAGAGCATAATCTTCTCCACATTTCCAGTGATGCCCTTCGTTTTTCACATCCAGACAATTACTGGTGCTTTCCATTTGAAAGGGCTGTAAGGAGATATGTTACTACAAAGTGCAACTTTAAGAACATTGAGTGCACATTTGCAAGGAAAGAAGCACGGAGAGAACTGCTACAGCATCTATCAAGGTACTTCGAGGGTCCTCCCAAACCGTTCAAATTATCTCTTGAAAAGATGAGTGCAACCAGTTTGGAAGGTGCAAGGCATCTGATGAAAATTGCTAACAATTCTGCTCATCATATAAACAATAGCAACAAGGGAATCCTTGTAGGTGGTTCTGACAGGAATGAAGTTCATTTATCACTACAAGAAGTGAATATGATAAAGTCATTTTTGGCCAGCTCATCAAGTGGCAATCGTGTTCCAGAACTTGCTTTCGCCTACAAAAGCCTCCTCAAGCCTCAGCAAGGAATTGAAGGTCAGGGACTTTTATACAGAAGTAGAGAGCACGCTTTCCTTGATGTGGAAAGTCAAGGTCCTTCAGTTGTCTTTATTGAAAGATTCCTGTGTTTGGAAATTGGAGGAGAGTATCACAAATTTGTCCAAGGCCAGTTTCTTCCTAGTAAGCTTGATGAAAATGGAAACATTGTGATATTTTCTGACACTGGTTTTCCTATTCTATGCAAAGATAGCCTCCCTAAAATGGTTATTCAACCCGTAACAtgtattttgagaaaggttatGGTTGTTTCCAATCCTTTTGAGCCCCAAGAGTCAGTTGTTATTGACTTTATGAGGAAGAGTATGCCATTGTCTGAGCACGATATTGTCGTTCCGTTTTACCCTGAGCGAGGAGATATGGTTTTGATCAATGGAACTGATCCTGAGCCATGGCTTGGAGAAGTAATGACTGTGGATGTAACTAATCAACTTGCTAAGGTCCGATATTACATCAGAAATGGGGAAAGAGAAGTTGGCTCCATTCTTGTTGATGTATTTGTCTCTGAGAGAAATGCCTGTTTAGACCAAAGGTGCTTGGAAAGACTAAAGAATGGAAGGCAGAAATTTGTAGATCGATTTAGAAAGAGTTCTATGGCTGATGATTCTCTCTTGGTGAAGGAAGTAATGGATGAAGAATGGCAACGACTGAGTGAAGAGAATTTGGAACTTCCACAATGGCGCCCAAGAAGAGAGACCTGCACACCTTTTTCAGGAgcTGATCTCGATGGATCTGAAGATTATTCGCTAGATGAGGTTCTATCAGTAATGGACGAAATTCAAAAAGAGCTTCTGAAGGAAGAGCGTAATATACTTGCTCGCGAACAATACGAAGAGAGTCTGAAGTTTGAAGAAGCCTCTTTATGTGCAGCAATTGAATGTCTTAGAACAGATGAAGTTCCTTGTCCAGTCTGTAAAAGCAACCCATTACATCAGAACAGGCAAGTTATTTTCTGTGCATGTGGACTAAGAATTGATACTGAGCATGATGCTGTCACCCTGACTTACGTTAGGAATCAAATTGAGTCAGCTCTCGAAGCACACAGGGATGAGCATTGCTTGGAGGAACCAGAATTTGGTTTATCCTTTGTGAAAGAACTTGGAGTGAGCAACCTAGTTTCACTTTGCAAGCCTGAAAAATTCTCCTTCAAAGAAGAAGAGTGGCCCAAATGGATGCGCCGTTTTGATAAATTTAGAAAGGCCACAGGCCTTGACGAGAAAAGTGAAGAAAACCAAGTGAATACGTTAATTTACTCAATGGGTGATGAAGTCAATGATTTCTTTGCTTCTTTCTCCCTGACAGAGGAGGAAAACCAGACATATGACATGGTGAAGGAGGACTTTATTCGTCATCTAAAGTCCATTTTTGCCAGACATGGGATTCCAGAGTATCTGACCTCTTATAACGGTCCTCAGTATGGCTCCAAAGCCTTCTCAGCTTTCTCTCGTGATTATGACTTCCAGCACATAACAAGGAGCCCTTCTTGTGCGCAAGTTAATGGGTTAGCAGAAGGAGCTGTGAAAACCGCAAAATCAATCCTGCTAAAGTCGTCAGACCCCTATGTGAGATTACTGTCTTACAGATCAGCTCCTTTAGGACGTGGTCACTCGCCTGCTCAACTGTCAATGTCCAGAAATATTACGACCACAATAGCTGTAGTAACAGATCAGCTGAAACCATCTGTAGTCCAACCGGACTGCTTTAAAGCTGaagcaaaatacaaaaaagaaactaaGGTCTTCGACTCTCAGCATGGAACAAGGCCACTACCATCTTTGGAAAATAGAGATCAAGTATGGATTCCCGATCTCCAAACAAAAGGAACAATCCAAGGAAATGCAGCAACTAGAGGCTACCATGTGCCTACTGAGAAAGGAAAGGTCAGACGAAATAGGAGACATCTAAATGAGCTTCGGAACGAGAACAGTACCCAAAACGAAGAACCCGAGGACGAAATGCAGCAAAGCAAACGGCTGGAAGAGCCAAAACCAGAAAACAGCGAAGACACTGCTAGAACACTTCAAGATCGGAACGTTAAGACAACTAGACGTAGTAGAGCTGTAAAGCCACCAAATAGATATCTTGAAAACCTGTAA

Transcript

BRAKERNUST00000022774

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86UA6	RPA-interacting protein OS=Homo sapiens OX=9606 GN=RPAIN PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000175 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14767 all species →	RPA_interact_M	Replication protein A interacting middle	Family	Interproscan
PF14768 all species →	RPA_interact_C	Replication protein A interacting C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR028155 all species →	Domain	RPA-interacting protein, central domain	Interproscan
IPR028156 all species →	Family	RPA-interacting protein	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR028159 all species →	Domain	RPA-interacting protein, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31742 all species →	RPA-INTERACTING PROTEIN RPAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000022774.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.