Gene detail

Detailed information of BRAKERNUSP00000024353.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029195782.1, sorting nexin-17-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RID7	Sorting nexin-17 OS=Danio rerio OX=7955 GN=snx17 PE=2 SV=1
Q6AYS6	Sorting nexin-17 OS=Rattus norvegicus OX=10116 GN=Snx17 PE=1 SV=1
Q15036	Sorting nexin-17 OS=Homo sapiens OX=9606 GN=SNX17 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004366 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21271 all species →	SNX17-31_F2_FERM	Sortin nexin 17/31, FERM domain, F2 lobe	Domain	Interproscan
PF18116 all species →	SNX17_FERM_C	Sorting Nexin 17 FERM C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037831 all species →	Family	SNX17/27/31-like	Interproscan
IPR048767 all species →	Domain	Sortin nexin 17/31, FERM domain, F2 lobe	Interproscan
IPR040842 all species →	Domain	Sorting nexin-17/31, FERM domain	Interproscan
IPR037836 all species →	Domain	SNX17, atypical FERM-like domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12431 all species →	SORTING NEXIN 17 AND 27	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:1990126 all species →	Biological Process	endocytic recycling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000024353.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.