Detailed information of BRAKERNUSP00000025899.1 in Montipora cactus

Genomic Location: BLFO01002248.1:406567...419255
NR annotation: XP_044177224.1, uncharacterized protein K02A2.6-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZTI5Mediator of RNA polymerase II transcription subunit 21 OS=Danio rerio OX=7955 GN=med21 PE=2 SV=1
Q2TBU8Mediator of RNA polymerase II transcription subunit 21 OS=Bos taurus OX=9913 GN=MED21 PE=2 SV=1
Q5RE46Mediator of RNA polymerase II transcription subunit 21 OS=Pongo abelii OX=9601 GN=MED21 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007064 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11221
all species →
Med21Subunit 21 of Mediator complexFamilyInterproscan
PF17917
all species →
RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037212
all species →
Homologous_superfamilyMediator complex, subunit Med7/Med21-likeInterproscan
IPR021384
all species →
FamilyMediator complex, subunit Med21Interproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951
all species →
FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373
all species →
DomainReverse transcriptase, RNase H-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984
all species →
PROTEIN CBG26694Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016592
all species →
Cellular Componentmediator complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000025899.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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