Gene detail

Detailed information of BRAKERNUSP00000026531.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029197029.2, cytosolic 10-formyltetrahydrofolate dehydrogenase-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000026531

ATGGGTTCCTTGAAGGTAGCGGTGATCGGACAGTCACAGTTTGGCTTGGAAGTTTACAAAAGTCTGCGCTCAAAAGGTCATGAAATTGTCGGAGTCTTTACCGTCCCCGATGTGAAAGGAAAGCCAGACATTTTAGCGACTGGAGCAGAACAAGACGGTGTTAAAGTTTTTAAGTTTCCTCGATGGAGGACAAAAGGAGAACCCATTCAAGGGGTTGTCGATACGTACAAGGCTTGCGGTGCTGAACTCAATGTTTTGCCATTTTGCTCACAATTTATCCCTATGAATGTGATCGACTTTCCAAAACATGGCTCAATAATTTATCATCCTTCCTTACTGCCAAGACACAGGGGGGCATCCGCCATAAATTGGACTCTTATGGAAGGTGATAAGCAAGGAGGTTTCAGTGTATTTTGGGCTGATGATGGTCTAGATACTGGTCCTATTCTGCTTCAAAAGAGTGTCGACATTGATCCAAATGATACAGTTGACACATTGTATAACAGATTCCTGTTTCCAGAAGGCATCAAAGGCATGGTTGAAGCAGTTGATTTAATTAGTGACGGAAAGGCACCAAAAATCCCTCAACCAGAAGAAGGGGCAACTTATGATAAAAtctggaaaaagaaagaggTTGCAAAGATAAATTTTGACCAGTCAGCAGAGGTGCTACACAATTTTATTCGTGGAAATGACAAGCTTCCAGGAGCTTGGGGCGTGATAAATGGCCAGCAAGTTACTCTGTATGGCTCCTCACTGACTTCTGGTGATAAACCTCCTGACGGGACCCCTGTGACAATAGAAGGCTCAGAGGTGCCTGCTATTGTGCATAAAGGTGGTATGACACTGACTGGAGTAGATGGAAAGAtgTTAACTGTAAAGACTTTGCAACTTGAAGATGGGCGCATGATCCAAGCAGCTAAGTTTGGTCAGATGGAGGAAGCAGCTGAGGCGATTGAGCTTACAGAGGAGGAGAAAAGCATGGAGGCAAAACTGAGGGAAATATGGGCTGGGATTTTGGCAAACCCCGATATTCTTGAAGATACAGACTTTTTCAAAGCTGGTGCTGGATCCATGGATGTTACAAGGCTCATTGAAGAACTGAAAGAAGCTTTCTCAATAGTGTTAGAAGCAGAAGACATTTACATGAATACAAGATATGGGGATTTTGTTCGCCTCTCTGTCCTGAGATCTCGAGGTGGAGGACTGGAGGAATTCAGTTGTAAAACTGTTGACATGGATGTGAACAACATGACAGTTTGCATGCCCAATCAGTTGTTCATTAATGGTGAATTTGTGGACTCATCCAGTGGAAGAACATTTGATTGCATAAACCCAGCTGATGGTTCGGTTATCACCCAAGTGGCTTTAGCATCAATTGAGGATGTGGATGCTGCAGTCACAGCTGCAAAGGAAGCCTTTTACCATGGGCCTTGGGGAACAATGAATGCCAGAGACCGTGGGCACCTAATGTACAAgGACAATGACAGCAACAATGATTATGACGACGATGAcaaggatgatgatgacgatgatgatgatgatgataacaaggACAATGATGGcgacaatgatgatgacgaaaacaatgatgatgatgatgacgacgaaaacaatgatgatgatgatgacgacaagaatgatgatgatgatgatgaagataacAGGGACAATGACAGcaacaatgatgatgacgacaatgacaaggatgatgatgatgataacaggGACAATGACAGCAAAAATGATTATGACGACGATGacaaggatgatgatgatgatgatgatgatgatgatgataacaaggACAATGATGGcgacaatgatgatgacgaaaacaatgatgatgatgacgacaagaatgatgatgatgatgatgataacaggGACAATGACAGcaacaatgatgatgacgacgatgacaaggatgatgatgatgataacaggGACAATGACAGCAACAATGATTATGAcgacgatgacaatgatgatgatgatgatgatgatgatgatgataacaaggacaatgatgatgataatgatgacaatgattaTGATGAGGAGGACAATGTTGCCAACAATGAGGATGATGACAACGATGATTATAGTGGTGACGATGATCGATACTGA

Transcript

BRAKERNUST00000026531

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GNL7	Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis OX=8355 GN=aldh1l1 PE=2 SV=1
Q3SY69	Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens OX=9606 GN=ALDH1L2 PE=1 SV=2
Q63ZT8	Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis OX=8364 GN=aldh1l1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004225 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02911 all species →	Formyl_trans_C	Formyl transferase, C-terminal domain	Domain	Interproscan
PF00171 all species →	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan
PF00551 all species →	Formyl_trans_N	Formyl transferase	Domain	Interproscan
PF00550 all species →	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036736 all species →	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR016162 all species →	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR037022 all species →	Homologous_superfamily	Formyl transferase, C-terminal domain superfamily	Interproscan
IPR005793 all species →	Domain	Formyl transferase, C-terminal	Interproscan
IPR001555 all species →	Active_site	Phosphoribosylglycinamide formyltransferase, active site	Interproscan
IPR015590 all species →	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR036477 all species →	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR002376 all species →	Domain	Formyl transferase, N-terminal	Interproscan
IPR009081 all species →	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR011034 all species →	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11138 all species →	METHIONYL-TRNA FORMYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0004479 all species →	Molecular Function	methionyl-tRNA formyltransferase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0071951 all species →	Biological Process	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000026531.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.