Detailed information of BRAKERNUSP00000027231.1 in Montipora cactus

Genomic Location: BLFO01002380.1:20435...33951
NR annotation: XP_029198273.2, RING finger protein 215-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SPX3RING finger protein 215 OS=Mus musculus OX=10090 GN=Rnf215 PE=2 SV=1
Q9Y6U7RING finger protein 215 OS=Homo sapiens OX=9606 GN=RNF215 PE=4 SV=2
Q29RU0E3 ubiquitin-protein ligase RNF128 OS=Bos taurus OX=9913 GN=RNF128 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010200 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan
PF18212
all species →
ZNRF_3_ectoZNRF-3 EctodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051073
all species →
FamilyZNRF3/Arkadia E3 ubiquitin-protein ligasesInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR040700
all species →
DomainZNRF-3, ectodomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16200
all species →
RING ZINC FINGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000027231.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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