Gene detail

Detailed information of BRAKERNUSP00000027439.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: CAH3188525.1, unnamed protein product [Porites evermanni]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q56JX8	Small ribosomal subunit protein uS15 OS=Bos taurus OX=9913 GN=RPS13 PE=2 SV=3
Q6ITC7	Small ribosomal subunit protein uS15 OS=Gallus gallus OX=9031 GN=RPS13 PE=1 SV=3
Q9WVH0	Small ribosomal subunit protein uS15 OS=Cricetulus griseus OX=10029 GN=RPS13 PE=3 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008229 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00312 all species →	Ribosomal_S15	Ribosomal protein S15	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000589 all species →	Family	Small ribosomal subunit protein uS15	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR009068 all species →	Homologous_superfamily	uS15/NS1, RNA-binding domain superfamily	Interproscan
IPR023029 all species →	Family	Small ribosomal subunit protein uS15, archaea/eukaryotes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11885 all species →	RIBOSOMAL PROTEIN S15P/S13E	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan
GO:0070181 all species →	Molecular Function	small ribosomal subunit rRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000027439.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.