Gene detail

Detailed information of BRAKERNUSP00000027758.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: CAH3173143.1, unnamed protein product [Porites evermanni]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P04053	DNA nucleotidylexotransferase OS=Homo sapiens OX=9606 GN=DNTT PE=1 SV=3
O02789	DNA nucleotidylexotransferase OS=Monodelphis domestica OX=13616 GN=DNTT PE=2 SV=1
Q9NP87	DNA-directed DNA/RNA polymerase mu OS=Homo sapiens OX=9606 GN=POLM PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009412 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14792 all species →	DNA_pol_B_palm	DNA polymerase beta palm	Domain	Interproscan
PF10391 all species →	DNA_pol_lambd_f	Fingers domain of DNA polymerase lambda	Domain	Interproscan
PF14716 all species →	HHH_8	Helix-hairpin-helix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036420 all species →	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR002054 all species →	Domain	DNA-directed DNA polymerase X	Interproscan
IPR002008 all species →	Family	DNA polymerase family X, beta-like	Interproscan
IPR022312 all species →	Family	DNA polymerase family X	Interproscan
IPR028207 all species →	Domain	DNA polymerase beta, palm domain	Interproscan
IPR001357 all species →	Domain	BRCT domain	Interproscan
IPR018944 all species →	Domain	DNA polymerase lambda, fingers domain	Interproscan
IPR027421 all species →	Homologous_superfamily	DNA polymerase lambda lyase domain superfamily	Interproscan
IPR001726 all species →	Family	DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu	Interproscan
IPR043519 all species →	Homologous_superfamily	Nucleotidyltransferase superfamily	Interproscan
IPR010996 all species →	Domain	DNA polymerase beta-like, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11276 all species →	DNA POLYMERASE TYPE-X FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006303 all species →	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0034061 all species →	Molecular Function	DNA polymerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000027758.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.