Detailed information of BRAKERNUSP00000027801.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029199018.2, protocadherin Fat 4-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q24292Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE=1 SV=3
E9PVD3Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1
D4ACX8Protocadherin-16 OS=Rattus norvegicus OX=10116 GN=Dchs1 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000235 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028
all species →
CadherinCadherin domainDomainInterproscan
PF01049
all species →
CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000233
all species →
DomainCadherin, Y-type LIR-motifInterproscan
IPR027397
all species →
Homologous_superfamilyCatenin binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24026
all species →
FAT ATYPICAL CADHERIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16507DCHS1_2, PCDH16_23; protocadherin-16/23-Cell adhesion moleculesko04515deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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