Gene detail

Detailed information of BRAKERNUSP00000028302.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029201596.2, exportin-T-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000028302

ATGCGAAATCTGTGCAGTGATGAAACTGCCAAGTTCTTTTGCTTCCAAGTTCTGGAACATCACATAAAAACCAGACATTCATCTTCTAGCCTGGTTGATCAACATACAGCTAGGGAGATTCTTTTGTCGTGGTTACGCAATCAGAGCTGTGCTGAATCAGACGATAAGAACTTTCTTAAGAATAAGGCTGCTCAGGTCTTCAGCTTGGTCTTTGTTTGCGACTACCCTGAAAATtggcCATCATTTTTTCTAGACCTTCTGCAATGCTTCCAGTTTGGATCTCGTGCTGTTGACATGTATTTGAGGATACTCAAGGCCATTGATGAAGAAGTTGTGGACAGAGATACTGTGAGGAGTCCACAGttaaatgAGAGGAGcactaaaataaaagatactATGAGGGATACCTGCATTACAGAGTTAGTGGACTCTTGGTACAGGATTTTGCAAACTTATGAAAGCAGTGCATCTTCATTAACCTGTCTTTGCCTGGACGTCATTGGGGCATACATTGAATGGATTGATATTGCGCTGATTGCCAATGACAGATTTATCAGCCTTTTGCTGCGATACATGTCAGTGGAAGTTCTTCGTGAGAGTGCCTGTGATTGCATTCATGAGATCATCTTGAAGGGTATGGAGCCCATGGCAAAAAAAGAGCTGGTGGAGTCACTGCTTATTGTCCTGGAACAAAGTGGTATTCTTCTTCCTCAGGAGGATGAAGATGCAGACTTCATGGCAAAGCTTGCCAAACTGATTAGTACAGCGGGAACTCAGCTTCTGAATAGCTACAGCAAGCTGTATAAATCAGGGGATACTGAAAATGCAGCCAAATGTTTGCAAGCAGCAGAGGACAAACTACAGTATATGTTTCGATTCTTAGACCATGAGGATGATGATGTTTCACAAAATGCTTCTGGTTTTGCATATACTTACCTAACTGTATTGAAACAGATAACAAACCAAAGTGAACATCATAAAACAAATCTGAGAGGAATGCTACATATGGTTCTAAAGAAGATGAAGTATGATGACTCGTACAATTTTGACCGTGAGGGAGAAGACGAAGTTATGTTTATTGAGTTCAGAAAGGAAATGAAGATTTTGTTTGACAACATTGCTCAATTGGATCCTAACTTGGCATTGGTTACTGTTCATGATATTTTGAGTTCGACCCTAGGAAATTTAAAGGGAGCTAAGTTTATGGATGTGGAGATGGCAGTGCGGGCTCTCTATATGATTGGGGAAGCTATGTCTACTCAGCAGTTATATTCCGATACTTCAAAGTTTGCCATGCTTCAGCAAATGATGACTTTGCTGGTTACAAGTGATGTTTCCTCTTACAGACATTCGTCAGTGGCTCAAATGTTCTTTGAAACAGTGGTTAGATATGACAGGTTCTTTGCCAGCCAGTCTCAGCATATCCCGACAGCACTGATGGCTTTTCTAGATGAGAGAGGCCTTCGCAACCCCAACTGTACAGTGAGGAGCAGATGTGCCTACCTATGTTCAAGATTCATAAAATCTCACAGGGCCAACGTGACCAATTACGCTTATGATGTATTAAAGACGCTTCAAGCCCTCCTAGTCATTTCTTCTgACAACGGTTACCAACATCTTCTTTCTGCCGATGATCAGttgTTCTTATATGAAAGTGCAGGGATATTGATTGTTGCCAGTGGTGCAGTTGCAGAGAAACAGTTGTTGTACATGCAAGATTTGCTGTCACCAGTCATTGCCAAGTTTGATGCTCTTGTTACAAAGATTCTTTCTGGATTTGATGATTCTTCATCTGCAGCTCAAGCACAGCAGCTGTATCATCTTGTAGCTTATGCCAGTCGTGCCAGCAAAGCATTCCCCAATCATCAGTCGTTGAAGGACAGTGGGTGTGCACCATGTTTTACAGAGGCATTACCCATTTTCTTGAGAGCTCTCACTATCCCAATACACAGGGACACCATCCACTCTGGTGTACGGCAGTACCTTCACAGGATGATTGTCTGCCTGGGAGATGGTGTACTACCATTTATACCTATGGCAGTTTCTCATCTTTTAGTGGAAGACTGTTCAGCAAGAGATATCCAGGAATTTATTCCCCTTATTAATCAAATAATTACAAGATTTAAGGCAACCAGAGAAAAGGAAACTTTGAGGCGCAGTTACTTCCTGTTTGTTGCAGCTGTTGTGACGAATGATGTCACTATAGTGCTAACCTCTCTAGACCACCAGGATCTACGTCAAGTGCTGATGACTTTAATTCAAGGCGCAGTTGAATTTCCAGATCCTGTGGCACAGAAGATTTCTTTCAATATACTTCGCAAACTGGTTGAACTCTGGGGAGGAAATGATAATGGATTAAACGGATTTGGAGAATTTATCTATGAGAATATTGTCCCGGCTACATTCATGGCTCCTATGAggtcaacatttgatttgactgaCGCTCAAACAATCTTGGCATTACAAGAGATTGTATCGAcacaaaaaacaattcttcaaAAGCAGggaGGGGAATTTATAAACTTCCTACAAAATACATATTTGCCAACACTACAGCTGACTCCACAAGCCATCCAGGTGAACAAGAAAGAGTTTCATGtcatattttga

Transcript

BRAKERNUST00000028302

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O43592	Exportin-T OS=Homo sapiens OX=9606 GN=XPOT PE=1 SV=2
Q5RA02	Exportin-T OS=Pongo abelii OX=9601 GN=XPOT PE=2 SV=1
Q9CRT8	Exportin-T OS=Mus musculus OX=10090 GN=Xpot PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002505 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19282 all species →	Exportin-T	Exportin-T	Family	Interproscan
PF08389 all species →	Xpo1	Exportin 1-like protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR045546 all species →	Domain	Exportin-T, C-terminal domain	Interproscan
IPR013598 all species →	Domain	Exportin-1/Importin-beta-like	Interproscan
IPR040017 all species →	Family	Exportin-T	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15952 all species →	EXPORTIN-T/LOS1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006409 all species →	Biological Process	tRNA export from nucleus	Interproscan
GO:0016363 all species →	Cellular Component	nuclear matrix	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0071528 all species →	Biological Process	tRNA re-export from nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000028302.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.