Gene detail

Detailed information of BRAKERNUSP00000028366.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029197043.1, intraflagellar transport protein 122 homolog isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000028366

ATGGAATCACTGATTCGATACATCAAAGTGATTGGTGGTCCTTCAGGAAGAGAAGGTCTTCTTGTTGGCTTAAAAAATGGACAGGCGCTTGGGTGTCAGGATGGCACCATAGCTTATTATCAACTAATTTTCAGCACAGTGCATGGCCTTTACAAAGATAGGTATGCTTTCAGGGACAACATGACAGATGTTATCATTCAACATTTAATCACTGAACAAAAAGtGCGAATCAAGTGTAGAGATCTGGTAAAGAAGATTGCAATCTACAGGCACAGACTAGCTGTTCAGCTTCCTGACAAGATTGTCATTTATGAACTGAATACAGATGATTTATCAGACATGCATTACAAAGTAAAGGTATTGAAGGCAAATTGTGTTTGgaaaaaattgaGCATAAATTTGAGTGTAATCTGCTTGTGGCTTGTTCCAACCACATCATTTTATGTCAGaGAATGGGTAATGGAATCACTGATTCGATACATCAAAGTGATTGGTGGTCCTTCAGGAAGAGAAGGTCTTCTTGTTGGCTTAAAAAATGGACAGATCATGAAGATATTTATTAACAATCCCTTTCCTCTGCCGATTCTGAAACAAGAGACAAGTGTTCGCTGTCTTGATTTGAGCACCAGCCGCACTAAGTTGGCAGTGGTTGATGAAAACAATACCTGTCTTGTCTACAACATCAAGACAAATGAACTTTTGTTCCAGGAGCCAAATGCCAACAGTGTGGCCTGGAACACACACTATGAGGacatgttgtgtttttctggtGGTGGAATGTTAAACATCAAAGCCAGCAACTTTCCAGTTCATCAACAGAAACTTCAGGGTTTTGTAGTTGGTTTTACAGGCTCTAAGATTTTCTGTCTTCATGTCTACACCATGTCTGCTGTGGAAGTGCCTCAGTCTGCCCCTATGTATCAATATTTGGAGAAGAAGCTATACAAAGATGCTTATAAAGTGGCTTGCCTTGGAGTTACTGAGGGAGACTGGAGAGCACTGGCCATGGAAGCACTGGAGGCCTTCATCAGAGTGCGTGATTTGAGGTATCTGGAGTTGATCCATAACATTGAGGAACGAAAAAAGCGAGGTGAAACTGACGAGCAAGCTTTCCTTGCAGATGTTTATGCTTATCAGGGCAAATTTCATGATGCTGGTAAGCTGTACAAAAAGACTGGAAATGATGCAAAGGCCATGGAGATGTTCACAGATCTCAGACAGTTTGAATATGCCAAGGATTTTATTGGTAGCAGTGACCCAAAGAATGTCAAACAACTGATTAAGAAGCAAGCAGAATGGTGTGAAACAACAAATGACTCCAAGGCAGCTGTtgatatGTTCCTTGCTGCGGGCGAAAATCTCAAAGCGATTGAAATTATTGGGCAGAACGGCTGGGTAGAAAAGCTATTGGAAGTTGGACGCAACCTCAACAAAGCAGAAGTTGAAGGACTGAAGCAATGCGCTTATTTCTTCAAACAACATGACCAGCATGGTTATGCCTCTGAGATGTACGTCAAGATTGGTGACATGAAAGCTCTTTTGGAACTGCACGTGGAATCCAAACATTGGGAGGAGGCCTTTGAACTTGCTGAGAAACATCCCGAATTTAAGGATGAAGTGTTTGTTCCCTATGCTAACTGGTTGGCGGAAAATGATCGATTTGATGAGGCCCAGGAAGCTTTCCATAAAGCTGGGAAACGAGACCAAGCTGTCAAGGTGTTGGAACAACTGTGTCATAATGCTGTGGTAGAACACAGGTTTCATGATGCTGGATATTATTTTTGGAAGCTGTCAGTTCAGTGTCTGGATCTGGTCTCCACGGAAAATTCCAACGCTGAACCAGACTATGAAATGCTGGACAAATTCCATGAATATCAGGAAAAAGCAGAAATATACCATCTGTATCACTCTATTCAGAGATACACGATGTATTCGCAGTTTAACTTAACAGTTCCTAGTTCGACCTTATTTGCTCTTGCTAAGCAGAGCAAGAATCTTGGAGCCTATAAAATGGCGCGTACGGCTTACGACAAACTTCAGTCGTTAAAAATTCCTCAACGTTTCCAAGAATCGATTGACGTGGGAAGTGTTACCATTCGCTCAAAACCATTCCATGATAGCGAGgaaTTGCTTCCTTTGTGCTACCGATGCTCCACTACAAACCCCCTTTTAAATAACAAAGGCAACCAGTGTATTAACTGCAGACAGCCCTTTGTGTATTCGTTTTCGTCTTTCGAGGTGCTTCCGTTGGTTGAGTTTGTCTTAGAGGATGGCATCAGTAACGAAGAAGCTCTTAAACTTATCGAGAAAGACTCGACGAAGACCGGGGGCAGAAAGAAAAGTGGCTCAAACTGGCAGGAGAAAGATATGGGAAGTATCCTTTGCCCTAATTCAAGGTGTACAGCATTTGGACCAAATACATGCAAGGAGGCTCAGTAA

Transcript

BRAKERNUST00000028366

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NYH1	Intraflagellar transport protein 122 homolog OS=Danio rerio OX=7955 GN=ift122 PE=2 SV=1
Q6NWV3	Intraflagellar transport protein 122 homolog OS=Mus musculus OX=10090 GN=Ift122 PE=1 SV=1
A8WGF4	Intraflagellar transport protein 122 homolog OS=Xenopus tropicalis OX=8364 GN=ift122 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002779 (this species only)

Pfam domain

No Pfam domain signature was detected for BRAKERNUSP00000028366.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR039857 all species →	Family	Intraflagellar transport protein 122/121 homolog	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12764 all species →	WD REPEAT DOMAIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030991 all species →	Cellular Component	intraciliary transport particle A	Interproscan
GO:0035721 all species →	Biological Process	intraciliary retrograde transport	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0061512 all species →	Biological Process	protein localization to cilium	Interproscan
GO:0097730 all species →	Cellular Component	non-motile cilium	Interproscan
GO:1905515 all species →	Biological Process	non-motile cilium assembly	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19656	IFT122; intraflagellar transport protein 122	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.