Gene detail

Detailed information of BRAKERNUSP00000028582.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_044173747.1, structure-specific endonuclease subunit SLX1 homolog [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7STV9	Structure-specific endonuclease subunit SLX1 homolog OS=Nematostella vectensis OX=45351 GN=v1g174298 PE=3 SV=1
Q0IH86	Structure-specific endonuclease subunit slx1 OS=Xenopus laevis OX=8355 GN=slx1a PE=2 SV=1
Q8BX32	Structure-specific endonuclease subunit SLX1 OS=Mus musculus OX=10090 GN=Slx1b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007305 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21202 all species →	SLX1_C	Structure-specific endonuclease subunit SLX1, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048749 all species →	Domain	Structure-specific endonuclease subunit SLX1, C-terminal domain	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR050381 all species →	Family	SLX1 structure-specific endonuclease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20208 all species →	STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0008821 all species →	Molecular Function	crossover junction DNA endonuclease activity	Interproscan
GO:0017108 all species →	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0033557 all species →	Cellular Component	Slx1-Slx4 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000028582.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.