Gene detail

Detailed information of BRAKERNUSP00000029224.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029205033.2, mitochondrial uncoupling protein 4-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZJ56	Large ribosomal subunit protein uL30 OS=Gallus gallus OX=9031 GN=RPL7 PE=1 SV=1
G1SV32	Large ribosomal subunit protein uL30 OS=Oryctolagus cuniculus OX=9986 GN=RPL7 PE=1 SV=2
O95847	Mitochondrial uncoupling protein 4 OS=Homo sapiens OX=9606 GN=SLC25A27 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006863 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08079 all species →	Ribosomal_L30_N	Ribosomal L30 N-terminal domain	Domain	Interproscan
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF00327 all species →	Ribosomal_L30	Ribosomal protein L30p/L7e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012988 all species →	Domain	Large ribosomal subunit protein uL30, N-terminal, eukaryotes	Interproscan
IPR036919 all species →	Homologous_superfamily	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR016082 all species →	Domain	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Interproscan
IPR018038 all species →	Conserved_site	Large ribosomal subunit protein uL30, conserved site	Interproscan
IPR005998 all species →	Family	Large ribosomal subunit protein uL30, eukaryotic	Interproscan
IPR039699 all species →	Family	Large ribosomal subunit protein uL30	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR035808 all species →	Domain	Large ribosomal subunit protein uL30, eukaryotic/archaeal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11524 all species →	60S RIBOSOMAL PROTEIN L7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000463 all species →	Biological Process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000029224.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.