Gene detail

Detailed information of BRAKERNUSP00000029948.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029200246.2, zinc finger protein 622-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91VY9	Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Mus musculus OX=10090 GN=Znf622 PE=1 SV=1
Q969S3	Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1
Q7TM96	Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Rattus norvegicus OX=10116 GN=Znf622 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008964 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12171 all species →	zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	Family	Interproscan
PF12756 all species →	zf-C2H2_2	C2H2 type zinc-finger (2 copies)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022755 all species →	Domain	Zinc finger, double-stranded RNA binding	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR040025 all species →	Family	Zinc finger protein 622/Rei1/Reh1	Interproscan
IPR041661 all species →	Domain	ZN622/Rei1/Reh1, zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13182 all species →	ZINC FINGER PROTEIN 622	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030687 all species →	Cellular Component	preribosome, large subunit precursor	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14816	REI1; pre-60S factor REI1	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.