Gene detail

Detailed information of BRAKERNUSP00000033648.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029184845.2, endo-1,4-beta-xylanase 3-like isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A3DH97	Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
F4JG10	Endo-1,4-beta-xylanase 3 OS=Arabidopsis thaliana OX=3702 GN=XYN3 PE=2 SV=1
A0A1P8AWH8	Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004413 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00331 all species →	Glyco_hydro_10	Glycosyl hydrolase family 10	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001000 all species →	Domain	Glycoside hydrolase family 10 domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR044846 all species →	Family	Glycoside hydrolase family 10	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31490 all species →	GLYCOSYL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01181	E3.2.1.8, xynA; endo-1,4-beta-xylanase	EC:3.2.1.8	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.