Gene detail

Detailed information of BRAKERNUSP00000034040.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029200457.2, zinc finger protein 271-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000034040

ATGGAAAATCAGGCACAACCTGCTACTATTAACCAATATCCTGATGGTTTCAATGAAGCTGACCAATTGCAGAATGCCATTTCTTCTAGCAAACTTTCCTCAGGCCATCAGAGTAGAAGTAGTAGTTCTGGTGCAGTACATTGTTACCAGTGCCCTGACTGTGACAAGGCTTTCTTGTACAAGTCAAAACTTCTCCTTCATCAAGTATGTCACAGTGTTGCGAGACCTTATAAATGTCCTCTCTGTGAAAAGACTTACAAACGAGAGTCTGAGCTTATAGTTCATCAAAGGGTGCATACTGGAGAGCGCCCTTTCGGGTGCATAAAGTGTGAGAAATCATTCAAAACCAAGTCTGAGCTTGTTGTTCATGACAGGTATCACACTGGTGAAAGACCTTACAAATGTACCCATTGTGAGAAATCTTTCAGAACAGCATCTGAACTTGGGGTACACAAGCGAGTTACTTCTGGTGAGAGAAATTTCAAGTGTACAAAGTGTGACAAAGCCTTTTTCCGGCAGGCGGACCTAACCTTTCATAAGAGGAGCCATTGCACAGAAAAGCCCCACAAGTGTAATCAATGTGGGAAAAGTTTTTCAACAGAATTTGATCTAAAGAAACATGAGAATAGCCACAAAGTTGTGAAGGTTATGAAATGTAAAATTTGTGATAAggcttttcaaagaaaagaacaactTAAAGCCCACGAAAGAACACATGTTACTACATCATCATATCAATGTTCAACTTGTTCATTGGATTTTAATAGCCCAGACGAACTATCTGCTCACAGTGAGACCCACTCTCGCAAGAAACTTTACAAATGTTCCCAGTGTGACAAGTCTTTTGCTTTCAAATCAAAGCTTTTTCAACACTGGGTGATCCACACAGGAGAAAGGCCATACAGATGCAACCAGTGCAACAAATCATATGGAAGAAAGTCAGAACTTGTTGTGCATCAAAGGATACACACAggagaaaaaccttttaaaTGTACAACTTGTGAAAAGTCCTTCAAGACAACGTCAGAACTGATTGTGCATTGTAGAACCCACACTGGTGAAAAGCCATACAGTTGTAGCTTTTGTGTGAAAAAATTTAAGACTGCATCAGAACTTGGTGTCCACCGAAGGAGCCACATTGGTGACAAGCCTTTCTCCTGCAGTCGATGTGATATGTCTTTTAAGCAAATGGCTGATCTCACTATACACAAAAAATTTCATCTTGTGGATCTACCCTTCAAATGCCATCTTTGCATTATGGCCTTTGGAAGTTCCTCTGAGCTTGCCAGTCACCAGGACTTGCACAGCTACATTCTCCACAACAGAGCACTTGAAAGCTCACCAGCAATTTCTACAAATGGAGTATTTAATTTAGTTCCTGGATTGAAAATGGCTGAACTTGCTGTTGCCAAAGAGGGTGTAGCTTGTGCTAAGGACGACAAGGCTGGTCATGTGAATGGAAAAGTCCATGCTGGTGAACCATATCTGGACATTGATAAGTTGATGAAAGTTGTGAGCAAACCCTTCAAGTGCAGTGAGTGCAGTAAAGCTTTTGTTTCCACTAATGAACTTGCAGGACATGTGAGAATTCACACAGGTGAGAGACCATTCAAGTGCCCTCAGTGTGACAATTGTTACCGCACTCCATCCACACTTTCTGTGCACATGAAAAGCCATATGAAGGAGAAGTGTTATAAATGCTCGTACTGTGAGGTGAGATGTCCTACACTGTCAATGCTTTTTGACCATTCCAAGCTGCACTATGACAAAAATGGTGCCAACAGTTGGCAGGAAAATGGTCATTGCAAACAAGAGCCAAATGGTGAGAATGCAGATGAAGAACCATTAAAATGCTGGGTTTGCCAAAAAGGTTTCCAGGAACAAGAAGCTCTTGACCATCACATTAGTCTTCATAAAGACAGAAGCAAAACTCTTGAACTGTGTGTTAAGAAGTTGAAAAGCTCTTTTGGAGGAGACTAA

Transcript

BRAKERNUST00000034040

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011128 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13912 all species →	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR017900 all species →	Conserved_site	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24379 all species →	KRAB AND ZINC FINGER DOMAIN-CONTAINING	Interproscan

Gene Ontology

No Gene Ontology signature was detected for BRAKERNUSP00000034040.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.