Gene detail

Detailed information of BRAKERNUSP00000034799.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: ARA71550.1, cadherin [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B8V7Q1	Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000983 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01049 all species →	CADH_Y-type_LIR	Cadherin, Y-type LIR-motif	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039808 all species →	Family	Cadherin	Interproscan
IPR027397 all species →	Homologous_superfamily	Catenin binding domain superfamily	Interproscan
IPR000233 all species →	Domain	Cadherin, Y-type LIR-motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24027 all species →	CADHERIN-23	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000902 all species →	Biological Process	cell morphogenesis	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005912 all species →	Cellular Component	adherens junction	Interproscan
GO:0007043 all species →	Biological Process	cell-cell junction assembly	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0016339 all species →	Biological Process	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0016342 all species →	Cellular Component	catenin complex	Interproscan
GO:0034332 all species →	Biological Process	adherens junction organization	Interproscan
GO:0044331 all species →	Biological Process	cell-cell adhesion mediated by cadherin	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0098742 all species →	Biological Process	cell-cell adhesion via plasma-membrane adhesion molecules	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000034799.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.