Gene detail

Detailed information of BRAKERNUSP00000035972.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_044177151.1, large proline-rich protein BAG6-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000035972

ATGTTGACCAACTTTCAGAATATCCCTGCTGATAAACAAAGGCTTATTTTTAAAGGCAAGGTCTTGCAGGATGACAAGTTGCTCTCTGATTATGGAGCTGATGGTTGTGTGATTCATCTTGTTGAAAGGAGACCTCAGACTGCTGGTGCAAGCTCTCAAGaTGGCACTAGCAGTAGTTCTTCCACCACTACTGGACCTTCTCCAGGCGGAGGCGTTGGACCTAATATTGTAATGGGAGCTTTCTCCATGCCAGTGGATGTTGTAGGTGCTACTCAGCAAATTGTCCAGAGTCTTGTTAATCAGCTTGGAGTGGACTCTGCTCAGGCTAACATCAGTACCTCATCTTCTGACGATGGCTCTTCTGTTAATGTTCACATTAACCTGCAAGCGACAACCCAGGGCGAGCTCCCCATGGATACATCAGAACCTTCCGATGACCAAAGGAGCAGCCAAACTGAGAATAGCTCTGCAGAAGAGAGCACAGCCGCTCTCTCCAGCCCAGAAGCTTTGGCACAGATCTTAAGGGAAGCGGGAGAGTCGATGACCTCTATGCAAACAGCTATGAATCGCTATGTCTCTCTTCTTGGAACAAACAGCCCAGAGGAGTTAAGTCCCTCTGAGGACACTTTACCTGATCGAGTTGCTGAAGCTTTCCATAATTTGAGTCATGCTTACCATGCCCTATCGGATATTACTTTCAATTTCCGTGGTTCAGAGCCAAGGAGGCCAAGTGTTCTGACACCTTTGTCTCCACATGGGGCTCAAGTACCTATGCTGTCCAGTCTTGTAGGTGCACCTCATTTGGTTCCCAATCCAGGGACCATGACGTCTTCAACAGCAGCAGGAACAACCCAGTCCAGTACTAGTGCAAGTCAGCAGCCACAGGGAACCAACCAAAACTTAAGAATTCATGTTAATCCTCAAGGTGGAATTTCTCTCACCACAATCATATCTAATGTATCACAGCCAGGTTCTGCAACACCAGCCAGCACACAGCTGACTTCCACAAGTGGTACAAGAATGAGTACCTCTACTGATAATGGGGCTGCAAGAGAGACATTGTCAAGCTTATTGGGTGAGCAGCAACCCTCTGCTGCTACAACTGCAAATAGTAATGTGACCAGCTCAAGCACTAGTGCAAGTTCATCATCTACACAGACTGGACAGCCAAGTGTAAGGACTCGTATTATTGTAGATGACTTCATTGCTTTGATTTCAAATGTCCCTGCCTCAGCAGCTGCGGCAGCAGCAGCAAGCCAGGGGCAGATGCCTGCAACAGCGCAGTCTGCAACTCCAAGTTTGCCTCAAATGATGGGAGTTGGAATAACAGCAACAGCCACCGGCTCTAACCAGTCTCAACCACAAACATCAGTATCGTCAGCACCAGGAGGGCCAAACCCTGCGCAAGCACAGGGTCAAGCAAGACCGCAAGGTTTGCCTGGTGGCATCCCCATGAACCTGATGTCTAATCTGGGTGCTGCAGCATCAAATCATCCTGACCCTTCCCTTCCTTGTCAGTCATTCCATTTTGGACCACAGTCAACGCGCTCTGCATCCCAGCAAACAACCCAGCAACCTCCTGTACCCACAACAGCTACACCAGCACCGCCACCACGCTCAACAGCTGCTACACCAACTACTATTCAGTCGCAAGCAGCCACTCAAAGTGAAACTCAGACGACCCCCTCAGTTAGCCAGCCACAACCTGCAAGAGAACGACCAAGGGCAACCCCTGAACGGAGGTTTAGAGctCGTGATCGTATGATCTCGCCTGCTGATCTTCAGGGAATCTTGGGGATGATGGCACATGATCAACGCACTGGTTTCAGAGGATTCCCACGATTACCTACTGGTTTGTTTGGCTCTAGAGGTGGTAGGCGCTCGGGTGGGCGACAGGCCAGGGGTTCGGATGGACAAAATGTCGTTTTGGACTTACTGGATAGTATTATATCAGATGCACGCAGACAAGGTGGAGGACAATCACAAACAATTAATGCAATTATCCAGGCCTTGAGGGCAAGTGGGATTGAAGTTCACGACGAAGAAGGATTACTACCAGCCCTTTTTAGTCGTCTCAGTAATGTGTTGACGATTGAGGATGTGATGGGCGTGGTCCTAGGTTCCGAGGATCCTTATGATAGAATGAGGCCTGCATTGTTGCGGTATATAAGCGAGGATCTTTTGCATGGAAATCCACAAACAAGTGAAAACTTAAGCGCTGGAGTTGCAGAACTTTGTAAAGAAATGGTCAACGGTATAGCCGACTCTATTCGAAGTGTTCCCACCAAAGATGACATTGACATTGTTGCCTCGTCTCAAAGTTTCCTGGAACACAATGTCAGAGTTGCAGTGGATTTAGTCCTGAGTTCAGAGGACAATCCTAGATTTGCAGAATATTTCCAAGACCATATAAAGGAAATTGTCATGGAATATTTCACATTGCTGGTGTTCTGTTACAGGGATGGCTTCGAGGGAGTCGAACAAGTTGTTCGGAGTAGAGCGCCTCAAGCAAGAATAACCGAAGACATGGATGAAGAAACGCGCGAAATTCTTGTGCAGATGCTACTAAGAAATATTCGGCAGATGTATTACAGCAGAGCTTACTGCTATCCACGTCTTGAGCGCTTTATGATCCGCGCTCCTTCACCCCCACCCCCTGGGGAAGAACAACCGCCGTCAAAGGAAAGCCACCCCCCTCAGGAAACAGTCGATGGCTTACCCAAGGGTGGAGCGGGGGCTGTTGATGAAGAAATGGATAGTCATGGATCTGATGACTCGGAAACGTTTACCACTCCCCCCGGATCTATTGCAGCTGACGCTGAACCGGATGTGCTCGAACCGGATTGTCCGGAGGGACAGCAGGGGGAGGATGCTATTGAAGAGGATGAGGGTGATGACGAGTGGAAAGCAATCATGCCCGAGGATTGGATCCCTGTAATTACAACCGATATTGTGCGCCAGAGAAGAATGCCGTCACAGGCACCTTTCAGTGATGCTTACATCAACGGGCGGCCACCCAAGAGGCGCAAGATTTTAGACCAGCAAAGTGTTGCACCCAGCGAGACCAGCATTAGTGACGCACTCAAACAAGCGGTGTCAGCCAGCGGCGCCACGCCTCTCACCAGCGTGGAAGCTCTGTCCAAAGCCGCAAAGGAAAATAGAGTTTTACACGACTCGTTCCGTAAAGAAGTCAAAAAGGAAGTAAAGTCAAGGCTAGAAAAAGATACAGACTACCGGCCTGACAGATTCCCCAATACAAGGGACTATTTTGACAAGGACACTCCATGA

Transcript

BRAKERNUST00000035972

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A3KPW9	Large proline-rich protein BAG6 OS=Danio rerio OX=7955 GN=Bag6 PE=3 SV=1
Q9YHD3	Large proline-rich protein bag6-A OS=Xenopus laevis OX=8355 GN=Bag6-a PE=2 SV=1
A4IH17	Large proline-rich protein bag6 OS=Xenopus tropicalis OX=8364 GN=Bag6 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004983 (this species only)
Ubiquitin family	ULD\|UBL\|NEDD8 · all ubiquitin genes in this species
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_Other · all ubiquitin genes in this species
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_PIM · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12057 all species →	BAG6	BCL2-associated athanogene 6	Domain	Interproscan
PF00240 all species →	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR021925 all species →	Domain	Large proline-rich protein BAG6	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15204 all species →	LARGE PROLINE-RICH PROTEIN BAG6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0031593 all species →	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan
GO:0051787 all species →	Molecular Function	misfolded protein binding	Interproscan
GO:0071818 all species →	Cellular Component	BAT3 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000035972.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.