Gene detail

Detailed information of BRAKERNUSP00000041342.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015757365.1, PREDICTED: uncharacterized protein LOC107336814 [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000041342

ATGGGACGGCGAAAGGGCAAAAGATTGGAAAAACACGATGCTGTGAAAGAAGAATTAATTTGCTCAGgaAGGAATATTTGTAGGCTCTGTAGACAGGAACCAAATGAAGAAGCGTTCGGAAAATTCTTTGTGGATTTAGAAACTGGATTTTCAGTTCATCAATACTGTATGTTCTTCTCTTCAGGTTTGGCTCAGCATGGAGAGGATGATGAAGGATTTGATGGCTTTCTAATCAAAGATAtcaaaagagaaatatcaagggCAAAAAGACTAagGTGTTATTTCTGTGGAAAGCGTGGTGCAACTATTGGTTGCTGTGAGAAAAGGTGCCCAAAAGCATTTCACTACTACTGTGGGCGTAGAAGTGGTGCTCTCTTTCAGTTTTTTGATAGTTTCAATTCATTCTGTATTTACCATCGTCCAACACAGTGCATTAAGTTAGTGCATAGCAATGGGCAAAATTGTCGAATTTGTTTGAGTGAAATAGAGTGGAATCCGAATAGTCACACTACCCTTTCTGAAGTCCCTCTTGTTACACCTTGTTGCAAGGCGTGGTTTCACAACAAATGTCTTCAGaaacatgCCCATTCGAGTGGTTTATATTACTTCAGATGCCCTCTATGCAATAACAAGGAGGAATTTCaagaagaaatgaaaagaaTGGGTGTTTTTATACCAGACCAGGATGCAAGTTGGGAAAAGGATAACGCCTTTGCTGATCTTCTGTTTCGCTACAACCGCTGTGATGCACGAAAGTGCATCTGTCCTCATGGAACAGAACACAAAGCAACTTCAGGAAAATGGCGTATTCGTCTGTGTGACTTGTGTGGTCAGTTTGGGACTCATTTAAAATGTCAACGCTGGAAAAGCCCACCAGATGAATGGTACTGTGACGTTTGTGGCAACACCCTGAATTATTCCAGTACGCGGAAAAGACCGGTTGTGGGCGACCGTTCCATGGATCCCTTCTTCAATGACACTGGTGGAAGCTCTTCGGACGAAGACTCTTATGTCAATGTATGCGGAGTATCAGATGATGATTTGCCTCTTGCAGCTATCCTCAAGAAGCGAAAGGGGACGATGAAGCCTAATAGCAGCACAGAAGAGCACCCATTTCCAGGGGAACCAGTACCAATGAGAGAAAGACATATAGAAACCTTGCAGCAAAAAACCGCCACTGAGGACCACAAAAGAGATACGTCATCTCCGAAGAAGGGGCAAGGAGAAGCTTTATCTCACAGTGAAAGCGAGGAAGAAGATTCAGGTCCTCCTATGAGGAAGCGGCGGCGGCTTTCTGTCACCCCTGGGGAAGGAAGGACAGGTCctctaaaacaaaaacaaactactTGCTCCGATTCTGAAAACACTTCGTGCTCACTAAATGGATTAGTAATGGAGTCTTCAGGAATGACACCTTCTCTGCTATTTGCAATTTCGAAATCTGTTACGGAGGGTTTGCTAAGTGACGATGATGCAACTGTAGAAGAAAAAACCTCGAGCATGGCAGTTACTCAAAAGGTAGAAGACGTAGAAGATTCTGCGACAGCAAGAGTTGACCCTATTGAtgaagtgattttaataaaggACACAGATTCAGAGAGTGTATCAGATCAGAGTGAGGGACTTTTAGAGTTAGATGCTGATGTATTTCaaggaaagcaaatgaaaaaagatAGCTCAAACTCCAAACAGTCGGTTGAAGATGTAATATCGAGAAGTCCATTTAAGAGGAGACGATATCATCGGGTAAGAAGATTAAAGCGTGTCACGGCCGCGCGAGTTAAAGCAGATTCAAGTACAAATGTGGTTTCAGTTAAAGTTGAGAGAGAATCACCATCAGAACAAGGTTGGTTGAATTTAAAAACGGAACAAGTAGAcaatgaaactgatgatgatTCCTGTCTCATTACAAAAGTTGTAAAACCACCTTGTCCCCATGGCAACGACAAGTTTTTTGGTAAGTGCATTTTAAGATGCTGCAATCCAACGTTGTTTGGTGGTCGAGATGTCATGACAACAACGAACTCCATACAAACCAACCACAAGTGCGAGGATTTACAAATTACCACAGTCACGTGTAGAAGCAGCGTCCGTCATAATCATATCCATTCATGTAAAGTGCATGATCAAGGGAGGACCGAAACCGCTGAAACCAAAGAATTTTGCAGTACAGGAATTAACACTTTGCCTTTCAAACTGTTTCCCAGGAAAGATTCCCCTTCCGAAGAAAGTACAATCACAGATACACAATGCCCAGCTGAAAATGGACCCGTTTCCACCTGTAGTCAAACGAAACTGCCGAAGTTGTGCAAGAGAAAGAAAGGCAGCTATTTGGAGAGATCTCTAAAACATTTCTTCGCCCTTCATGATAATCATGACCCCGTCAGCCACAAATGCATGAGATGA

Transcript

BRAKERNUST00000041342

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F4A1	G2/M phase-specific E3 ubiquitin-protein ligase OS=Gallus gallus OX=9031 GN=G2E3 PE=2 SV=1
Q9BWX1	E3 ubiquitin-protein ligase PHF7 OS=Homo sapiens OX=9606 GN=PHF7 PE=1 SV=1
Q5RJY2	G2/M phase-specific E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=G2e3 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004400 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13771 all species →	zf-HC5HC2H	PHD-like zinc-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042013 all species →	Domain	PHF7/G2E3, ePHD domain	Interproscan
IPR051188 all species →	Family	PHD-type Zinc Finger Domain-Containing Protein	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan
IPR034732 all species →	Domain	Extended PHD (ePHD) domain	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12420 all species →	PHD FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.